Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 3,311,259 C→G G188R (GGC→CGC)  PP_2907 ← two‑component system response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,311,2590CG99.3% 1048.7 / NA 297G188R (GGC→CGC) PP_2907two‑component system response regulator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (137/158);  minor base T (0/2);  total (137/160)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 298 total aligned reads displayed.

CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA  >  NC_002947/3311112‑3311405
                                                                                                                                                   |                                                                                                                                                  
    cggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATc                                                                                                                                              <  1:538218/150‑1 (MQ=255)
       cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           <  2:3478467/150‑1 (MQ=255)
       cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           <  1:2167468/150‑1 (MQ=255)
          gTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTg                                                                                                                                        >  2:1709713/1‑150 (MQ=255)
          gTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTg                                                                                                                                        >  1:3969013/1‑150 (MQ=255)
             gaagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATa                                                                                                                                     >  2:8022965/1‑150 (MQ=255)
              aagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAg                                                                                                                                    >  2:1414485/1‑150 (MQ=255)
               agaaCTCCAGCCTTTAGACGGGTTCGGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                   >  1:2778111/1‑150 (MQ=255)
               agaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                   >  1:1168613/1‑150 (MQ=255)
               agaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                   <  2:5809338/150‑1 (MQ=255)
                    tCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg                                                                                                                              >  2:5043332/1‑150 (MQ=255)
                    tCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg                                                                                                                              >  2:189263/1‑150 (MQ=255)
                     ccAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGa                                                                                                                             <  1:1074328/150‑1 (MQ=255)
                     ccAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGa                                                                                                                             <  1:5867859/150‑1 (MQ=255)
                         ccTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTc                                                                                                                         >  1:4201981/1‑150 (MQ=255)
                         ccTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTc                                                                                                                         >  1:8396493/1‑150 (MQ=255)
                         ccTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTc                                                                                                                         <  1:7272945/150‑1 (MQ=255)
                            ttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTc                                                                                                                      <  1:6764684/150‑1 (MQ=255)
                                aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                  <  2:4764374/150‑1 (MQ=255)
                                aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                  <  2:7537815/150‑1 (MQ=255)
                                 cGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaaa                                                                                                                 >  2:8378090/1‑150 (MQ=255)
                                 cGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGACACGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCACCTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaaa                                                                                                                 <  2:6122120/150‑1 (MQ=255)
                                    gTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatca                                                                                                              >  1:707366/1‑150 (MQ=255)
                                     ttCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcat                                                                                                             >  2:6421365/1‑150 (MQ=255)
                                     ttCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcat                                                                                                             <  2:5310428/150‑1 (MQ=255)
                                                 aTAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGAt                                                                                                 >  1:1605164/1‑150 (MQ=255)
                                                  tAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATc                                                                                                <  2:9287865/150‑1 (MQ=255)
                                                   aGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGCCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCa                                                                                               >  2:2730946/1‑150 (MQ=255)
                                                      cGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCt                                                                                            <  1:3990958/150‑1 (MQ=255)
                                                       ggAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTg                                                                                           <  2:6767579/150‑1 (MQ=255)
                                                           ccccGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCg                                                                                       <  1:1985810/150‑1 (MQ=255)
                                                              cgtaccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtg                                                                                    <  1:5174144/150‑1 (MQ=255)
                                                                taccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgtg                                                                                  <  2:8693982/150‑1 (MQ=255)
                                                                taccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgtg                                                                                  <  2:5659423/150‑1 (MQ=255)
                                                                 accgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTgg                                                                                 >  2:1628167/1‑150 (MQ=255)
                                                                     tacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCa                                                                             >  1:186701/1‑150 (MQ=255)
                                                                       cGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATc                                                                           <  1:5598525/150‑1 (MQ=255)
                                                                        ggATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCa                                                                          >  2:4789460/1‑150 (MQ=255)
                                                                         gATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAg                                                                         <  2:3458851/150‑1 (MQ=255)
                                                                         gATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAg                                                                         >  1:7722526/1‑150 (MQ=255)
                                                                          aTCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAgg                                                                        <  2:1046172/150‑1 (MQ=255)
                                                                            cAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCCGGCGGCCGATGGGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACGTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTa                                                                      <  1:8669849/150‑1 (MQ=255)
                                                                              gcggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCGTCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACt                                                                    >  1:2687945/1‑150 (MQ=255)
                                                                                   gACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagc                                                               >  2:7296189/1‑150 (MQ=255)
                                                                                    aCTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagca                                                              >  2:783900/1‑150 (MQ=255)
                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                          <  2:3707860/150‑1 (MQ=255)
                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                          <  2:7732800/150‑1 (MQ=255)
                                                                                           gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatc                                                                                                               >  1:1714852/1‑94 (MQ=255)
                                                                                           gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                       <  1:7560976/150‑1 (MQ=255)
                                                                                           gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                       >  2:3006399/1‑150 (MQ=255)
                                                                                           gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                       >  2:6336168/1‑150 (MQ=255)
                                                                                            ggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTAc                                                      <  2:3941656/150‑1 (MQ=255)
                                                                                            ggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTAc                                                      <  1:646909/150‑1 (MQ=255)
                                                                                             gTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCa                                                                          >  1:3513323/1‑129 (MQ=255)
                                                                                             gTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCGTGTAcg                                                     >  2:3115952/1‑149 (MQ=255)
                                                                                              tGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTc                                                    <  1:7414110/150‑1 (MQ=255)
                                                                                              tGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTc                                                    <  1:6896677/150‑1 (MQ=255)
                                                                                                aGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCgg                                                  <  2:3254752/150‑1 (MQ=255)
                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACGTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                                <  1:4121235/150‑1 (MQ=255)
                                                                                                   cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTgg                                               <  2:2560945/150‑1 (MQ=255)
                                                                                                    gATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGt                                                 >  2:9105910/1‑147 (MQ=255)
                                                                                                    gATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTggg                                              >  1:6391692/1‑150 (MQ=255)
                                                                                                    gATCTTCTTGCGCAGGCGGCCGAGGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGt                                                 <  1:9105910/147‑1 (MQ=255)
                                                                                                       cttcttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCaa                                           <  2:6611559/150‑1 (MQ=255)
                                                                                                         tcttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACa                                         <  2:4043540/150‑1 (MQ=255)
                                                                                                           ttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAgg                                       <  1:3379095/150‑1 (MQ=255)
                                                                                                            tGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGt                                      <  2:6232187/150‑1 (MQ=255)
                                                                                                            tGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGt                                      <  2:3568273/150‑1 (MQ=255)
                                                                                                               gcAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGa                                   <  2:1250441/150‑1 (MQ=255)
                                                                                                               gcAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGa                                   <  1:6559568/150‑1 (MQ=255)
                                                                                                                cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                  <  2:4360177/150‑1 (MQ=255)
                                                                                                                cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                  <  1:501058/150‑1 (MQ=255)
                                                                                                                cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                  <  1:8581142/150‑1 (MQ=255)
                                                                                                                 aGGCGGCCGATGTTCACGTCGATCAGGTTGGTGCTCGGATCGAAGTGATAGCCCCAGACTTCCTAGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCTCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGatg                                 <  2:2836992/150‑3 (MQ=255)
                                                                                                                 aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg                                 <  2:5184207/150‑1 (MQ=255)
                                                                                                                 aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg                                 >  2:4572332/1‑150 (MQ=255)
                                                                                                                 aGGCGGCCGAGGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACGTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg                                 <  2:5968982/150‑1 (MQ=255)
                                                                                                                    cggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtg                              <  1:2450306/150‑1 (MQ=255)
                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATGGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             <  1:1312240/150‑1 (MQ=255)
                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                       >  2:6960692/1‑124 (MQ=255)
                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             <  2:1099078/150‑1 (MQ=255)
                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             >  1:3189925/1‑150 (MQ=255)
                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTAATACAGCAGCATGTACTAGGTGGGCAACAGGTTGAGGgtgt                             >  1:4755612/1‑150 (MQ=255)
                                                                                                                      gcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgtt                            <  1:6287620/150‑1 (MQ=255)
                                                                                                                      gcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACGTCCTATAAAATCATCATCCGCTTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTTCTCGGTGGGCAACAGGTTGAGGGtgtt                            <  1:7630977/150‑1 (MQ=255)
                                                                                                                        cGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                          >  1:2916391/1‑150 (MQ=255)
                                                                                                                         gATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTc                         >  2:8165967/1‑150 (MQ=255)
                                                                                                                          aTGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCt                                                           >  2:4483668/1‑115 (MQ=255)
                                                                                                                          aTGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCt                                                           <  1:4483668/115‑1 (MQ=255)
                                                                                                                          aTGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCa                        <  1:9439692/150‑1 (MQ=255)
                                                                                                                                aCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                                <  2:4205799/120‑1 (MQ=255)
                                                                                                                                  gTCGAACAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCAACATCCGCGTGATCACCTCGCCGCTGAGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCgcggcg                >  2:2048988/1‑150 (MQ=255)
                                                                                                                                   tCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGgcgc               <  2:7586802/150‑1 (MQ=255)
                                                                                                                                     gATCAGGTTGGTGCGCGGATTGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGgcgcgc             >  2:8899866/1‑150 (MQ=255)
                                                                                                                                      aTCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                          <  1:6124134/136‑1 (MQ=255)
                                                                                                                                          ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGt        <  1:3756339/150‑1 (MQ=255)
                                                                                                                                          ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGt        <  1:7992226/150‑1 (MQ=255)
                                                                                                                                           gTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg       >  1:1740515/1‑150 (MQ=255)
                                                                                                                                            ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTgg      <  1:8917981/150‑1 (MQ=255)
                                                                                                                                                tGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGa  >  1:4903243/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA  >  NC_002947/3311112‑3311405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑