BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	3,311,259	C→G	G188R (GGC→CGC)	PP_2907 ←	two‑component system response regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,311,259	0	C	G	100.0%	878.5 / NA	248	G188R (GGC→CGC)	PP_2907	two‑component system response regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (115/133); total (115/133)

Only 100 of 249 total aligned reads displayed.

CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA  >  NC_002947/3311112‑3311405

   gcggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGAt                                                                                                                                               >  2:2878644/1‑150 (MQ=255)

    cggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATc                                                                                                                                              <  2:5862941/150‑1 (MQ=255)

    cggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATc                                                                                                                                              <  2:6269748/150‑1 (MQ=255)

       cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           <  2:177886/150‑1 (MQ=255)

             gaagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGAt                                                                                                                                      >  2:7641143/1‑149 (MQ=255)

             gaagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGAt                                                                                                                                      <  1:7641143/149‑1 (MQ=255)

             gaagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATa                                                                                                                                     <  2:3709626/150‑1 (MQ=255)

              aagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAg                                                                                                                                    >  2:4529316/1‑150 (MQ=255)

               agaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                   >  1:7158044/1‑150 (MQ=255)

               agaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTCGACGTGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                   >  1:5852940/1‑150 (MQ=255)

                gaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGcc                                                                                                                                  >  1:2383327/1‑150 (MQ=255)

                   cTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCa                                                                                                                               <  1:3229840/150‑1 (MQ=255)

                    tCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg                                                                                                                              >  2:969911/1‑150 (MQ=255)

                      cAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGAc                                                                                                                            >  2:4018634/1‑150 (MQ=255)

                      cAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGAc                                                                                                                            >  1:3537574/1‑150 (MQ=255)

                       aGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACt                                                                                                                           >  1:4627211/1‑150 (MQ=255)

                       aGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACt                                                                                                                           >  2:4861770/1‑150 (MQ=255)

                          cTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTcc                                                                                                                        >  2:6723837/1‑150 (MQ=255)

                           tttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           >  2:1819030/1‑130 (MQ=255)

                               gACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaa                                                                                                                   <  1:5814033/150‑1 (MQ=255)

                                aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                  <  2:6690821/150‑1 (MQ=255)

                                aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                  <  2:4290787/150‑1 (MQ=255)

                                aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                  >  1:2124333/1‑150 (MQ=255)

                                 cGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaaa                                                                                                                 <  1:1013057/150‑1 (MQ=255)

                                    gTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatca                                                                                                              <  2:7564004/150‑1 (MQ=255)

                                     ttCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcat                                                                                                             >  2:6380549/1‑150 (MQ=255)

                                       cAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcatca                                                                                                           >  2:468968/1‑150 (MQ=255)

                                         gCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcatcatc                                                                                                         >  1:7516895/1‑150 (MQ=255)

                                         gCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcatcatc                                                                                                         >  2:7691138/1‑150 (MQ=255)

                                            aTGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCTGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcgc                                                                                                      <  2:6095823/150‑1 (MQ=255)

                                              ggCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGt                                                                                                    <  1:6583123/150‑1 (MQ=255)

                                                 aTAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGTGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGAt                                                                                                 <  2:6037979/150‑1 (MQ=255)

                                                 aTAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGAt                                                                                                 <  1:4438282/150‑1 (MQ=255)

                                                 aTAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGAt                                                                                                 <  1:6124592/150‑1 (MQ=255)

                                                  tAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATa                                                                                                                                     <  2:5721569/113‑1 (MQ=255)

                                                   aGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCa                                                                                               >  2:7244658/1‑150 (MQ=255)

                                                    gCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAc                                                                                              >  1:5561361/1‑150 (MQ=255)

                                                    gCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAc                                                                                              <  2:7787766/150‑1 (MQ=255)

                                                       ggAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTg                                                                                           >  2:5604671/1‑150 (MQ=255)

                                                        gAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTgg                                                                                          >  1:5357363/1‑150 (MQ=255)

                                                        ctgatccgtacggtaCGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTgg                                                                                          >  1:744224/6‑150 (MQ=255)

                                                         aGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           >  1:5035482/1‑100 (MQ=255)

                                                             ccgtaccgtaCGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGAACGAAGTGATAGCCCCAGACTTCCTCGAAAAACATCATCCGCGGGATCACCTGGCCGCt                                                                                     >  2:3755294/1‑150 (MQ=255)

                                                              cgtaccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtg                                                                                    >  2:1103653/1‑150 (MQ=255)

                                                                 accgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTgg                                                                                 <  1:6380549/150‑1 (MQ=255)

                                                                 accgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTgg                                                                                 <  1:2567488/150‑1 (MQ=255)

                                                                 accgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTgg                                                                                 <  1:7053207/150‑1 (MQ=255)

                                                                     tacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCa                                                                             >  2:7247719/1‑150 (MQ=255)

                                                                     tacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCa                                                                             >  1:273876/1‑150 (MQ=255)

                                                                             aGCGGCGACTGGCCGGGTGAGTCGATCTTCTTTCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTAc                                                                     <  1:3664658/150‑1 (MQ=255)

                                                                                ggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTcc                                                                  >  2:2654559/1‑150 (MQ=255)

                                                                                 gcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCca                                                                 >  1:485121/1‑150 (MQ=255)

                                                                                   gACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagc                                                               >  1:3773433/1‑150 (MQ=255)

                                                                                     cTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagcag                                                             >  2:2757967/1‑150 (MQ=255)

                                                                                      tGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCagcagc                                                            <  1:248701/150‑1 (MQ=255)

                                                                                      tGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCagcagc                                                            >  1:1339520/1‑150 (MQ=255)

                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                          <  1:3986453/150‑1 (MQ=255)

                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                          >  2:3251185/1‑150 (MQ=255)

                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                          <  2:514232/150‑1 (MQ=255)

                                                                                        gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGAAGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCGGTGGCCCATCAGGTACTCCAGCAGCtt                                                          >  1:118929/1‑150 (MQ=255)

                                                                                         ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGACCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTg                                                         <  1:765852/150‑1 (MQ=255)

                                                                                           gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                       <  2:3139724/150‑1 (MQ=255)

                                                                                             gTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCTCGTCGATCAGGTTGGTGCGCGGATCGATGTGATAGCCCCAGACTTCCTCGAAATTCATCATCCGCGTGTTCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCTGCTTGTTCt                                                     <  2:1225850/150‑1 (MQ=255)

                                                                                                 gTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTc                                                    <  1:4492734/147‑1 (MQ=255)

                                                                                                 gTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTc                                                    >  2:4492734/1‑147 (MQ=255)

                                                                                                 gTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGt                                                 >  1:6867276/1‑150 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATc                                                                                                                                              >  2:1767684/1‑56 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           <  2:6955360/59‑1 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                           >  1:6955360/1‑59 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                                >  2:2512382/1‑150 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                                >  2:3611685/1‑150 (MQ=255)

                                                                                                  tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                                >  2:1742405/1‑150 (MQ=255)

                                                                                                   cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTgg                                                                                          >  1:4451929/1‑107 (MQ=255)

                                                                                                     aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc                                             <  1:3251185/150‑1 (MQ=255)

                                                                                                     aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc                                             >  1:3481306/1‑150 (MQ=255)

                                                                                                          cttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAg                                        <  1:1069808/150‑1 (MQ=255)

                                                                                                               gcAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGa                                   <  1:6182763/150‑1 (MQ=255)

                                                                                                                cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                  <  2:2447154/150‑1 (MQ=255)

                                                                                                                   gcggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgt                               <  1:2068250/150‑1 (MQ=255)

                                                                                                                     ggcCGATGTTCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCAGGCAGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             >  1:1450118/1‑150 (MQ=255)

                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatc                                                                                                               <  1:869585/68‑1 (MQ=255)

                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatc                                                                                                               >  2:869585/1‑68 (MQ=255)

                                                                                                                     ggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCACTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             <  2:2151830/150‑1 (MQ=255)

                                                                                                                      gcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgtt                            <  2:404207/150‑1 (MQ=255)

                                                                                                                       ccGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttg                           >  1:5380298/1‑150 (MQ=255)

                                                                                                                        cGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                          >  2:4463123/1‑150 (MQ=255)

                                                                                                                        cGATGTGCACGTCGATCAGGTTGGTGCGCGCATCGAAGTGATAGCCCCAGACTTCCTCGAAAAACATCATCCGAGTGATCACCTGGCCGCTGTGGCGCAACAGGTACTCCAGCAGCTAGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                          >  2:3991436/1‑150 (MQ=255)

                                                                                                                            gtgCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCAcc                      >  1:1672268/1‑150 (MQ=255)

                                                                                                                                aCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTGGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCgcgg                  >  1:3396682/1‑150 (MQ=255)

                                                                                                                                   tCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGgcgc               >  2:4361661/1‑150 (MQ=255)

                                                                                                                                     gATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             >  2:2182019/1‑134 (MQ=255)

                                                                                                                                     gATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgtgt                             <  1:2181581/134‑1 (MQ=255)

                                                                                                                                          ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCCTCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGt        <  1:1894509/150‑1 (MQ=255)

                                                                                                                                          ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATc                                                                           <  2:1483724/83‑1 (MQ=255)

                                                                                                                                           gTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg       <  2:224120/150‑1 (MQ=255)

                                                                                                                                           gTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg       <  1:1774240/150‑1 (MQ=255)

                                                                                                                                            ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTgg      <  1:5770520/150‑1 (MQ=255)

                                                                                                                                            ttGGCGCGCGGCTCGAAGTGATAGCCCCAGACGTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTgg      <  2:5363539/150‑1 (MQ=255)

                                                                                                                                              ggTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCt    <  2:6865755/150‑1 (MQ=255)

                                                                                                                                                tGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGa  <  1:8024510/150‑1 (MQ=255)

CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA  >  NC_002947/3311112‑3311405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`