BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	188,837	C→T	R316C (CGC→TGC)	PP_0165 →	GGDEF domain‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	188,837	0	C	T	100.0%	1024.9 / NA	287	R316C (CGC→TGC)	PP_0165	GGDEF domain‑containing protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (153/134); total (153/134)

Only 100 of 287 total aligned reads displayed.

GTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCCGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAGGCC  >  NC_002947/188691‑188981

gTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCa                                                                                                                                               <  2:3341291/150‑1 (MQ=255)

     ctgctgTTTCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGccac                                                                                                                                          >  1:728126/1‑148 (MQ=255)

        ctgTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGcc                                                                                                                                            <  2:3151768/145‑1 (MQ=255)

        ctgTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGcc                                                                                                                                            >  1:3151768/1‑145 (MQ=255)

        ctgTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCgcggc                                                                                                                                       >  1:6042648/1‑150 (MQ=255)

           ttGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCgcggcggc                                                                                                                                    >  2:4956165/1‑150 (MQ=255)

             gctgcGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGa                                                                                                                                  <  1:1014772/150‑1 (MQ=255)

             gctgcGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGa                                                                                                                                  >  1:5675761/1‑150 (MQ=255)

               tgcGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGt                                                                                                                                >  2:4255306/1‑150 (MQ=255)

               tgcGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGt                                                                                                                                >  2:2036345/1‑150 (MQ=255)

                gcGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGtt                                                                                                                               <  2:4765723/150‑1 (MQ=255)

                  gggTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTg                                                                                                                             <  1:1407105/150‑1 (MQ=255)

                  gggTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTg                                                                                                                             <  1:4956165/150‑1 (MQ=255)

                   ggTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGc                                                                                                                            >  2:3876090/1‑150 (MQ=255)

                    gTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCa                                                                                                                           <  1:4571587/150‑1 (MQ=255)

                    gTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCa                                                                                                                           <  1:1803225/150‑1 (MQ=255)

                    gTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCa                                                                                                                           <  1:3876090/150‑1 (MQ=255)

                        aGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGc                                                                                                                       >  2:5119501/1‑150 (MQ=255)

                        aGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGc                                                                                                                       <  2:1117442/150‑1 (MQ=255)

                         gggCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCt                                                                                                                      <  2:5844321/150‑1 (MQ=255)

                          tgCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTg                                                                                                                     <  1:2258198/149‑1 (MQ=255)

                             ctggctggCCTGAACGCCAGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTgagcaag                                                                                                                  >  2:5961290/1‑144 (MQ=255)

                                  tggcCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCggg                                                                                                             >  2:1234843/1‑150 (MQ=255)

                                   ggcCTGAACGCCCGCC‑TGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCa                                                                                                           >  1:3210309/1‑150 (MQ=255)

                                    gcCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCa                                                                                                           >  1:5197822/1‑150 (MQ=255)

                                      cTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATg                                                                                                         <  1:3639060/150‑1 (MQ=255)

                                      cTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATg                                                                                                         >  2:4647780/1‑150 (MQ=255)

                                         aaCGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTg                                                                                                      >  1:5906048/1‑150 (MQ=255)

                                         aaCGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTg                                                                                                      <  1:6206873/150‑1 (MQ=255)

                                          aCGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGc                                                                                                     <  2:5880122/150‑1 (MQ=255)

                                            gcccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCAt                                                                                                   <  1:3096897/150‑1 (MQ=255)

                                            gcccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCAt                                                                                                   <  1:526107/150‑1 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGa                                                                                                                                  >  1:3312880/1‑117 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCCTGGTGCATgt                                                                                                 >  1:4182059/1‑149 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATga                                                                                                 >  2:5702721/1‑150 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATga                                                                                                 >  1:1092562/1‑150 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATga                                                                                                 >  1:6505233/1‑150 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATga                                                                                                 <  2:5403747/150‑1 (MQ=255)

                                              ccgccTTGGCGGCCAGCGTACCGACCAGGTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATga                                                                                                 >  2:6986510/1‑150 (MQ=255)

                                                 ccTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATgagga                                                                                              <  1:322951/150‑1 (MQ=255)

                                                     ggcggcCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCa                                                                                          <  2:7055779/150‑1 (MQ=255)

                                                            aGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACAcc                                                                                   <  2:6511046/150‑1 (MQ=255)

                                                               gTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTg                                                                                <  2:1020886/150‑1 (MQ=255)

                                                                tACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGc                                                                               >  2:6880985/1‑150 (MQ=255)

                                                                   cGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCATCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCa                                                                            >  2:1903513/1‑150 (MQ=255)

                                                                   cGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCATTTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGccc                                                                             >  2:4515012/1‑150 (MQ=255)

                                                                   cGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGt                                                                                        >  1:2813547/1‑138 (MQ=255)

                                                                    gACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAg                                                                           <  1:5361537/150‑1 (MQ=255)

                                                                       cAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGct                                                                        <  2:3210262/150‑1 (MQ=255)

                                                                         gttgttGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGctct                                                                      >  1:2002828/1‑150 (MQ=255)

                                                                          ttgttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTg                                                                                                      >  1:4083624/1‑117 (MQ=255)

                                                                          ttgttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTg                                                                                                      <  2:4083624/117‑1 (MQ=255)

                                                                            gttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGa                                                                   <  2:6701282/150‑1 (MQ=255)

                                                                            gttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGa                                                                   <  2:3923857/150‑1 (MQ=255)

                                                                            gttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGa                                                                   <  2:5197822/150‑1 (MQ=255)

                                                                             ttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAg                                                                  <  2:1531658/150‑1 (MQ=255)

                                                                             ttgCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAg                                                                  <  1:2640824/150‑1 (MQ=255)

                                                                             ttgCAAGCGGTAGGTGAACAGCTGAGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAg                                                                  <  2:4059176/150‑1 (MQ=255)

                                                                               gCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGc                                                                <  1:6581379/150‑1 (MQ=255)

                                                                                     ggTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGtt                                                          >  1:357665/1‑150 (MQ=255)

                                                                                     ggTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGtt                                                          >  2:6791140/1‑150 (MQ=255)

                                                                                     ggTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGtt                                                          >  2:2164411/1‑150 (MQ=255)

                                                                                     ggTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTAGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGtt                                                          >  1:5574367/1‑150 (MQ=255)

                                                                                      gTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGAGCATGAGGAGGCAGTACACCTTGCCCAGGCTCAGGAGGCAACGTTg                                                         >  2:1812062/1‑150 (MQ=255)

                                                                                        aGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCGGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCa                                                       <  1:5050976/150‑1 (MQ=255)

                                                                                          gTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCaga                                                     >  1:6331895/1‑150 (MQ=255)

                                                                                          gTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCaga                                                     <  2:2878437/150‑1 (MQ=255)

                                                                                          gTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCaga                                                     <  1:426788/150‑1 (MQ=255)

                                                                                            gAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTg                                                         <  1:4849906/144‑1 (MQ=255)

                                                                                                 gCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCa                                              <  2:2275711/150‑1 (MQ=255)

                                                                                                 gCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGACGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCa                                              <  2:1699512/150‑1 (MQ=255)

                                                                                                             ttGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGtt                                                          <  1:6903484/126‑1 (MQ=255)

                                                                                                             ttGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGc                                  >  2:2582164/1‑150 (MQ=255)

                                                                                                               gtgCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCa                                <  2:5578373/150‑1 (MQ=255)

                                                                                                                  ccAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTg                             >  2:2192680/1‑150 (MQ=255)

                                                                                                                   cAGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGa                            <  2:2782438/150‑1 (MQ=255)

                                                                                                                    aGCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGat                           >  2:107486/1‑150 (MQ=255)

                                                                                                                     gCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGata                          <  1:1253204/150‑1 (MQ=255)

                                                                                                                     gCTACCCGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGata                          <  1:6157083/150‑1 (MQ=255)

                                                                                                                          ccGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTgggcaag                                          >  2:872733/1‑123 (MQ=255)

                                                                                                                          ccGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTgggcaag                                          <  1:872733/129‑7 (MQ=255)

                                                                                                                          ccGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGAc                     >  1:3043088/1‑150 (MQ=255)

                                                                                                                          ccGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGAc                     >  2:439664/1‑150 (MQ=255)

                                                                                                                           cGGAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGAcc                    >  1:5167505/1‑150 (MQ=255)

                                                                                                                            ggAAACCAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGAccc                   >  2:1590160/1‑150 (MQ=255)

                                                                                                                                 ccAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTgg              >  2:3231194/1‑150 (MQ=255)

                                                                                                                                  cAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGc             >  2:147461/1‑150 (MQ=255)

                                                                                                                                  cAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGc             <  2:632917/150‑1 (MQ=255)

                                                                                                                                  cAACGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGc             >  1:4440305/1‑150 (MQ=255)

                                                                                                                                   aaCGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCt            >  1:2780721/1‑150 (MQ=255)

                                                                                                                                    aCGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCtt           <  1:1672061/150‑1 (MQ=255)

                                                                                                                                    aCGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCtt           <  1:6973799/150‑1 (MQ=255)

                                                                                                                                    aCGACCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCtt           <  2:3117539/150‑1 (MQ=255)

                                                                                                                                       aCCTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGta        <  2:2424164/150‑1 (MQ=255)

                                                                                                                                       aCCTCA‑TGTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGAGGGCCAGTGATATCGACCCGGTGGCTTGta        <  1:241974/150‑1 (MQ=255)

                                                                                                                                        ccTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGtat       >  1:6786452/1‑150 (MQ=255)

                                                                                                                                         cTCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGtata      >  2:2356247/1‑150 (MQ=255)

                                                                                                                                          tCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAg     >  1:254214/1‑150 (MQ=255)

                                                                                                                                          tCA‑TTTCCTGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAg     >  2:2856435/1‑150 (MQ=255)

                                                                                                                                            a‑TTTCCTGCAGCCGCGGCGGCAAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAGGc   >  2:1385642/1‑150 (MQ=255)

GTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTTGTTGCAAGCGGTAGGTGAACAGCTGCGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCA‑TTTCCCGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGGCAGTACACCTTGCCCAGGCTCTGGAGGCAACGTTGCAGAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAGGCC  >  NC_002947/188691‑188981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`