Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 2,384,391 C→A Q227K (CAA→AAA)  cmpX → protein CmpX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,384,3910CA99.7% 1266.9 / ‑5.1 356Q227K (CAA→AAA) cmpXprotein CmpX
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base A (184/171);  total (185/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 359 total aligned reads displayed.

CAGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAA  >  NC_002947/2384244‑2384537
                                                                                                                                                   |                                                                                                                                                  
cagcTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACaaa                                                                                                                                                  >  2:4149536/1‑150 (MQ=255)
   cTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTTTCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTc                                                                                                                                               <  2:6223280/150‑1 (MQ=255)
    ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCg                                                                                                                                              <  2:3299894/150‑1 (MQ=255)
    ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCg                                                                                                                                              >  1:8302158/1‑150 (MQ=255)
    ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCAGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCg                                                                                                                                              <  1:5577724/150‑1 (MQ=255)
      gAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGc                                                                                                                                            >  2:3041481/1‑150 (MQ=255)
      gAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGc                                                                                                                                            <  1:916727/150‑1 (MQ=255)
       aaGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGcc                                                                                                                                           <  2:8587015/150‑1 (MQ=255)
         gTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcag                                                                                                                                         >  2:1166475/1‑150 (MQ=255)
           gAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagca                                                                                                                                       >  2:5202675/1‑150 (MQ=255)
              aaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGt                                                                                                                                    >  2:3460792/1‑150 (MQ=255)
                ccGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGTTGTACAAAGTCGGCCAGCAGGTGc                                                                                                                                  <  1:870244/150‑1 (MQ=255)
                  gACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCgg                                                                                                                                <  2:72121/150‑1 (MQ=255)
                   aCCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGa                                                                                                                               >  1:2604135/1‑150 (MQ=255)
                    ccTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAt                                                                                                                              <  2:1963211/150‑1 (MQ=255)
                    ccTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAt                                                                                                                              <  2:3224223/150‑1 (MQ=255)
                      tgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGTGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAttt                                                                                                                            <  2:6903090/150‑2 (MQ=255)
                      tgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTg                                                                                                                            >  2:6996358/1‑150 (MQ=255)
                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  1:382290/150‑1 (MQ=255)
                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  1:7784759/150‑1 (MQ=255)
                           aaCCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGagag                                                                                                                       <  2:6330467/150‑1 (MQ=255)
                                 gTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGaa                                                                                                                 <  2:1559549/150‑1 (MQ=255)
                                  tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAg                                                                                                                <  2:4634264/150‑1 (MQ=255)
                                  tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGGTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAg                                                                                                                <  2:7929842/150‑1 (MQ=255)
                                   cATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGgaga                                                                                                                        >  2:16657/1‑141 (MQ=255)
                                   cATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAgg                                                                                                               <  2:1281685/150‑1 (MQ=255)
                                    aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAggg                                                                                                              >  2:7554754/1‑150 (MQ=255)
                                    aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAggg                                                                                                              >  1:7851176/1‑150 (MQ=255)
                                     tCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGc                                                                                                             >  2:294773/1‑150 (MQ=255)
                                       gTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCat                                                                                                           >  2:6426068/1‑150 (MQ=255)
                                         tATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCatat                                                                                                         <  1:4605233/150‑1 (MQ=255)
                                          aTCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATc                                                                                                        >  2:4065423/1‑150 (MQ=255)
                                             gggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagc                                                                                                                                        >  2:5636097/1‑115 (MQ=255)
                                             gggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     >  1:7376601/1‑150 (MQ=255)
                                              ggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGgaga                                                                                                                        <  1:3910693/130‑1 (MQ=255)
                                                   aTTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGGCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCCGATCGAGGAGATc                                                                                               >  1:5008765/1‑150 (MQ=255)
                                                        cGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGaa                                                                                                                 <  1:2672859/127‑1 (MQ=255)
                                                             gTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGa                                                                                     >  2:2297666/1‑150 (MQ=255)
                                                                tGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAgg                                                                                                               >  2:3867889/1‑121 (MQ=255)
                                                                     gTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     >  1:3205376/1‑126 (MQ=255)
                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGGAGACGACgctgct                                                                        >  1:4422895/1‑150 (MQ=255)
                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                        <  1:8142739/150‑1 (MQ=255)
                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCAGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                        >  1:2271238/1‑150 (MQ=255)
                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  1:1782773/1‑150 (MQ=255)
                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  2:6063893/1‑150 (MQ=255)
                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  1:3778527/1‑150 (MQ=255)
                                                                            tGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGa                                                                      <  1:6631830/150‑1 (MQ=255)
                                                                               ccATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCg                                                                   >  1:4136130/1‑150 (MQ=255)
                                                                                cATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  2:5385463/94‑1 (MQ=255)
                                                                                cATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCga                                                                  >  2:6134801/1‑150 (MQ=255)
                                                                                   gggCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAATGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatga                                                               >  2:2062617/1‑150 (MQ=255)
                                                                                   gggCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatga                                                               >  1:2396435/1‑150 (MQ=255)
                                                                                     gCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAATGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             >  1:5945799/1‑150 (MQ=255)
                                                                                     gCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             <  2:2165916/150‑1 (MQ=255)
                                                                                      ccTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATgg                                                            <  2:8433285/150‑1 (MQ=255)
                                                                                       cTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGc                                                           >  1:6772524/1‑150 (MQ=255)
                                                                                          ggCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGaa                                                        <  1:6101709/150‑1 (MQ=255)
                                                                                              gTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTgg                                                    <  1:8562565/150‑1 (MQ=255)
                                                                                               tCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgt                                                   <  2:9328/150‑1 (MQ=255)
                                                                                                 gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             <  1:5359026/138‑1 (MQ=255)
                                                                                                 gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCGGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgtgt                                                 >  2:6718922/1‑150 (MQ=255)
                                                                                                  cgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGc                                                           <  1:3029718/139‑1 (MQ=255)
                                                                                                   gtagatGCCGGCCAGGATCTGCCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGaa                                                                                    >  2:5025735/6‑113 (MQ=38)
                                                                                                   gAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCa                                               >  1:307508/1‑150 (MQ=255)
                                                                                                   gAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCa                                               <  2:7291739/150‑1 (MQ=255)
                                                                                                     aaTTGCCTGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACt                                             <  2:8080704/150‑1 (MQ=255)
                                                                                                     aaTTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACt                                             <  2:655700/150‑1 (MQ=255)
                                                                                                     aaTTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACt                                             <  2:577329/150‑1 (MQ=255)
                                                                                                            gggCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAAc                                      >  2:5291488/1‑150 (MQ=255)
                                                                                                               cAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACcgc                                   <  1:191478/150‑1 (MQ=255)
                                                                                                                aGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACcgcg                                  <  2:8468056/150‑1 (MQ=255)
                                                                                                                 gATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGa                                 <  2:6701900/150‑1 (MQ=255)
                                                                                                                  aTCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgagga                                                                                                   <  1:6690298/83‑1 (MQ=255)
                                                                                                                  aTCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAg                                >  1:7533394/1‑150 (MQ=255)
                                                                                                                  aTCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAg                                >  2:2548337/1‑150 (MQ=255)
                                                                                                                   tCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgc                               <  2:7712212/150‑1 (MQ=255)
                                                                                                                    ccTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTGCGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgct                              <  2:2745166/150‑1 (MQ=255)
                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                            >  1:335957/1‑150 (MQ=255)
                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                            <  1:5702465/150‑1 (MQ=255)
                                                                                                                       ggCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgct                           <  2:2700719/150‑1 (MQ=255)
                                                                                                                        gCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCtt                          >  2:6657002/1‑150 (MQ=255)
                                                                                                                        gCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCtt                          <  2:3640370/150‑1 (MQ=255)
                                                                                                                        gCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCtt                          <  1:5174696/150‑1 (MQ=255)
                                                                                                                         ccGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgt                                                   <  1:1264167/124‑1 (MQ=255)
                                                                                                                          cGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACcgcg                                  <  1:147558/140‑1 (MQ=255)
                                                                                                                            gCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAAc                      >  1:7981267/1‑150 (MQ=255)
                                                                                                                              aTCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAg                    >  1:4013396/1‑150 (MQ=255)
                                                                                                                                cTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgcg                  <  2:2271238/150‑1 (MQ=255)
                                                                                                                                 tACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgcgc                 >  2:4417269/1‑150 (MQ=255)
                                                                                                                                 aaCGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgcgc                 <  2:8816827/149‑1 (MQ=255)
                                                                                                                                     tGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCa             >  1:539083/1‑150 (MQ=255)
                                                                                                                                      gcgcGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCaa            >  1:6168203/1‑150 (MQ=255)
                                                                                                                                      gcgcGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCaa            >  1:580247/1‑150 (MQ=255)
                                                                                                                                              tGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCt    >  1:7114211/1‑150 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCAc                                              <  1:8397019/106‑1 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTc              >  2:7807000/1‑138 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  >  2:7151359/1‑150 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  >  1:6825101/1‑150 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  <  1:900867/150‑1 (MQ=255)
                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  >  2:8373553/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CAGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAA  >  NC_002947/2384244‑2384537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑