Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_002947 1,515,811 (33-bp)2→1 pseudogene (715‑747/1851 nt) PP_1325 ← putative lipoprotein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 1515769 1515801 33 485 [1] [0] 479 PP_1325 putative lipoprotein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1515802 =0 (0.000)338 (1.160) 140/200 0.0 100% pseudogene (756/1851 nt) PP_1325 putative lipoprotein
?NC_002947 = 1515768 0 (0.000)pseudogene (790/1851 nt) PP_1325 putative lipoprotein

Only 100 of 479 total aligned reads displayed.

GCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAGGC  >  NC_002947/1515656‑1515951
                                                                                                                                                  |                                                                                                                                                     
gagccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTg                                                                                                                                                    >  1:9180955‑M1/147‑150 (MQ=255)
gagccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTg                                                                                                                                                    >  2:3251480‑M1/147‑150 (MQ=255)
gagccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTg                                                                                                                                                    >  1:1716838‑M1/147‑150 (MQ=255)
  gccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGt                                                                                                                                                  >  1:2271179‑M1/145‑150 (MQ=255)
   ccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTc                                                                                                                                                 >  1:7350154‑M1/144‑150 (MQ=255)
     gatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAg                                                                                                                                               <  2:7442325‑M1/9‑1 (MQ=255)
     gatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAg                                                                                                                                               <  2:3700926‑M1/9‑1 (MQ=255)
        gcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCgg                                                                                                                                            <  2:6463202‑M1/12‑1 (MQ=255)
          gtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggct                                                                                                                                          <  1:5171003‑M1/14‑1 (MQ=255)
          gtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggct                                                                                                                                          <  1:581299‑M1/14‑1 (MQ=255)
           tgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggctg                                                                                                                                         <  1:6399644‑M1/15‑1 (MQ=255)
                tgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGgctggctg                                                                                                                                     <  1:8991452‑M1/19‑1 (MQ=255)
                tgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGctggctgg                                                                                                                                    <  1:6155932‑M1/20‑1 (MQ=255)
                 gtcgaacacctgtagcgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagtgcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCtggctggc                                                                                                                                   >  1:1402259‑M1/130‑150 (MQ=255)
                  tcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGCCAGCGGCTGGCTGGcc                                                                                                                                  <  2:4821970‑M1/22‑1 (MQ=255)
                    gaacacctgtaccgcaggcgctggctggccgctttgctgggcctggacgtgggcggccatgaagccatagcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAg                                                                                                                                <  1:4824450‑M1/24‑1 (MQ=255)
                    gaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAg                                                                                                                                <  2:2839453‑M1/24‑1 (MQ=255)
                          ctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCtt                                                                                                                          >  1:8507545‑M1/121‑150 (MQ=255)
                          ctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCtt                                                                                                                          >  2:5491011‑M1/121‑150 (MQ=255)
                           tgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTg                                                                                                                         <  2:452771‑M1/31‑1 (MQ=255)
                           tgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTg                                                                                                                         <  1:7240086‑M1/31‑1 (MQ=255)
                            gtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGTCAGCTCCTTGa                                                                                                                        >  2:730034‑M1/119‑150 (MQ=255)
                             taccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAg                                                                                                                       <  2:9028430‑M1/33‑1 (MQ=255)
                              accgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGc                                                                                                                      >  1:844987‑M1/117‑150 (MQ=255)
                               ccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCt                                                                                                                     <  1:5295643‑M1/35‑1 (MQ=255)
                                cgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCtt                                                                                                                    >  2:8482759‑M1/115‑150 (MQ=255)
                                 gcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTg                                                                                                                   >  1:6705065‑M1/114‑150 (MQ=255)
                                 gcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTg                                                                                                                   >  1:8746129‑M1/114‑150 (MQ=255)
                                 gcaggcgcgggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTg                                                                                                                   >  1:4401803‑M1/114‑150 (MQ=255)
                                   aggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggctgg                                                                                                                                        <  1:3893314‑M1/16‑1 (MQ=255)
                                   aggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCtt                                                                                                                          >  2:6979302‑M1/112‑141 (MQ=255)
                                   aggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTg                                                                                                                   >  1:9094173‑M1/112‑148 (MQ=255)
                                   aggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGt                                                                                                                 <  1:2555434‑M1/39‑1 (MQ=255)
                                     gcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCtt                                                                                                                          <  2:864711‑M1/30‑1 (MQ=255)
                                     gcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCtt                                                                                                                          >  1:864711‑M1/110‑139 (MQ=255)
                                         tggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGc                                                                                                           <  2:1481879‑M1/45‑1 (MQ=255)
                                         tggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGc                                                                                                           <  2:2482915‑M1/45‑1 (MQ=255)
                                               gccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCgg                                                                                                     >  2:1094042‑M1/100‑150 (MQ=255)
                                                 cgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCa                                                                                                   >  1:7891796‑M1/98‑150 (MQ=255)
                                                  cgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcggggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAg                                                                                                  <  1:4992656‑M1/54‑1 (MQ=255)
                                                    tttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGtt                                                                                                <  2:2007267‑M1/56‑1 (MQ=255)
                                                    tttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGtt                                                                                                <  2:6843421‑M1/56‑1 (MQ=255)
                                                        ctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTg                                                                                            >  2:9125852‑M1/91‑150 (MQ=255)
                                                         tgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTgg                                                                                           <  2:5352751‑M1/61‑1 (MQ=255)
                                                          gggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTggg                                                                                          <  2:4997663‑M1/62‑1 (MQ=255)
                                                          gggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTggg                                                                                          <  2:5094581‑M1/62‑1 (MQ=255)
                                                           ggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGggc                                                                                         >  1:2200521‑M1/88‑150 (MQ=255)
                                                              ctggaagtggccgcacaagaagacatcgcgcacggcgcgcgctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTAGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGggcggc                                                                                      <  2:5815893‑M1/66‑1 (MQ=255)
                                                               tggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCGTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCa                                                                                     <  2:2646391‑M1/67‑1 (MQ=255)
                                                                 gaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAgg                                                                                                             >  2:1203775‑M1/82‑124 (MQ=255)
                                                                 gaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAgg                                                                                   >  1:7503996‑M1/82‑150 (MQ=255)
                                                                      gggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGggtggt                                                                              >  2:5241179‑M1/77‑150 (MQ=255)
                                                                      gggcggccatcaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGggtggt                                                                              <  2:7177183‑M1/74‑1 (MQ=255)
                                                                         cggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCg                                                                           >  1:1025296‑M1/74‑150 (MQ=255)
                                                                          ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          >  2:2159000‑M1/73‑150 (MQ=255)
                                                                          ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          >  1:3108632‑M1/73‑150 (MQ=255)
                                                                           gccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCggg                                                                         >  2:6336722‑M1/72‑150 (MQ=255)
                                                                             catgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTg                                                                       <  2:8047408‑M1/81‑1 (MQ=255)
                                                                                gtagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTTAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTg                                                                    <  1:2057230‑M1/84‑1 (MQ=255)
                                                                                gaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTg                                                                    <  2:7578848‑M1/84‑1 (MQ=255)
                                                                                gaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTg                                                                    <  1:3754729‑M1/84‑1 (MQ=255)
                                                                                  agccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGtt                                                                  >  1:4589948‑M1/65‑150 (MQ=255)
                                                                                      atcgcgcagggcgcgggctacaccggccagcgggccttcctgaggccgcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGAc                                                              <  1:7606577‑M1/90‑1 (MQ=255)
                                                                                      atcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTggg                                                                                          <  2:8325142‑M1/62‑1 (MQ=255)
                                                                                       tcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGtt                                                                  <  2:8998823‑M1/86‑1 (MQ=255)
                                                                                                  gcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCa                                                                                                   <  2:6744723‑M1/53‑1 (MQ=255)
                                                                                                     ggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGc                                               >  1:6856369‑M1/46‑150 (MQ=255)
                                                                                                      gctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGcc                                              >  1:6802589‑M1/45‑150 (MQ=255)
                                                                                                        tacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGc                                            >  1:9566623‑M1/43‑150 (MQ=255)
                                                                                                             cggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggctggct                                                                                                                                      <  1:9289724‑M1/18‑1 (MQ=255)
                                                                                                             cggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAgg                                                                                                             <  2:3388584‑M1/43‑1 (MQ=255)
                                                                                                             cggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgct                                       >  2:571645‑M1/38‑150 (MQ=255)
                                                                                                             cggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgct                                       >  1:2590913‑M1/38‑150 (MQ=255)
                                                                                                                ccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgctgct                                    <  1:5458281‑M1/116‑1 (MQ=255)
                                                                                                                  agcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgctgctgc                                  >  1:8132400‑M1/33‑150 (MQ=255)
                                                                                                                     gggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTcc                               >  2:9597403‑M1/30‑150 (MQ=255)
                                                                                                                      ggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCa                              <  2:8758966‑M1/122‑1 (MQ=255)
                                                                                                                      ggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCa                              >  1:452771‑M1/29‑150 (MQ=255)
                                                                                                                       gccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAg                             <  2:4623226‑M1/123‑1 (MQ=255)
                                                                                                                        ccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAgg                            <  2:1862187‑M1/124‑1 (MQ=255)
                                                                                                                         cttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAggg                           <  2:1305285‑M1/125‑1 (MQ=255)
                                                                                                                          ttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGt                          <  1:9482759‑M1/126‑1 (MQ=255)
                                                                                                                            cctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGc                        <  1:6303256‑M1/128‑1 (MQ=255)
                                                                                                                              tgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGt                                                                                                                 <  2:3530663‑M1/39‑1 (MQ=255)
                                                                                                                                  gcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGgcgc                  >  1:6929039‑M1/17‑150 (MQ=255)
                                                                                                                                   cagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTggg                                                                                          >  1:1218479‑M1/16‑77 (MQ=255)
                                                                                                                                    agcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCtt                <  2:427064‑M1/136‑1 (MQ=255)
                                                                                                                                    agcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCtt                >  2:4949905‑M1/15‑150 (MQ=255)
                                                                                                                                    agcagcagggcgatCGTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCtt                >  1:6561959‑M1/15‑150 (MQ=255)
                                                                                                                                     gcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCttt               >  1:428103‑M1/14‑150 (MQ=255)
                                                                                                                                     gcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCttt               <  1:3355588‑M1/137‑1 (MQ=255)
                                                                                                                                       agccgggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTc             <  1:2870068‑M1/139‑1 (MQ=255)
                                                                                                                                       agcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAg                             >  1:407164‑M1/12‑134 (MQ=255)
                                                                                                                                       agcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTc             >  2:2944395‑M1/12‑150 (MQ=255)
                                                                                                                                            ggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGGCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGc        <  2:939805‑M1/144‑1 (MQ=255)
                                                                                                                                            ggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGc        <  2:1726765‑M1/144‑1 (MQ=255)
                                                                                                                                            ggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGc        <  2:3992667‑M1/144‑1 (MQ=255)
                                                                                                                                            ggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGc        <  1:3513072‑M1/144‑1 (MQ=255)
                                                                                                                                                atCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAg    <  1:4628833‑M1/148‑1 (MQ=255)
                                                                                                                                                  CTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAGGc  >  2:6216798‑M1/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAGGC  >  NC_002947/1515656‑1515951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑