BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	2,384,391	C→A	Q227K (CAA→AAA)	cmpX →	protein CmpX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,384,391	0	C	A	98.0%	1313.1 / 7.7	351	Q227K (CAA→AAA)	cmpX	protein CmpX
Reads supporting (aligned to +/- strand): ref base C (3/4); new base A (161/183); total (164/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 352 total aligned reads displayed.

AGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTA  >  NC_002947/2384245‑2384536

agcTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACaaa                                                                                                                                                 <  2:4633317/149‑1 (MQ=255)

  cTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGt                                                                                                                                               <  1:7418148/149‑1 (MQ=255)

   ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTc                                                                                                                                              <  1:6503137/149‑1 (MQ=255)

   ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTc                                                                                                                                              <  1:2898502/149‑1 (MQ=255)

   ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTc                                                                                                                                              <  2:4245470/149‑1 (MQ=255)

     gAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCgg                                                                                                                                            >  2:795768/1‑149 (MQ=255)

      aaGTGAACACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGc                                                                                                                                           <  1:5953734/149‑1 (MQ=255)

      aaGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGc                                                                                                                                           >  1:589570/1‑149 (MQ=255)

      aaGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGc                                                                                                                                           >  2:1717367/1‑149 (MQ=255)

       aGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGcc                                                                                                                                          >  1:8051067/1‑149 (MQ=255)

          gAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagc                                                                                                                                       >  2:2803829/1‑149 (MQ=255)

            aaaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagcag                                                                                                                                     >  2:9037174/1‑149 (MQ=255)

            aaaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagcag                                                                                                                                     >  1:1657151/1‑149 (MQ=255)

              aCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGt                                                                                                                                   >  2:6996741/1‑149 (MQ=255)

                 gACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCg                                                                                                                                <  1:710122/149‑1 (MQ=255)

                 gACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCg                                                                                                                                <  1:4893984/149‑1 (MQ=255)

                 gACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCg                                                                                                                                >  1:427092/1‑149 (MQ=255)

                  aCCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCgg                                                                                                                               <  2:6842780/149‑1 (MQ=255)

                     tgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAtt                                                                                                                            <  2:1308849/149‑1 (MQ=255)

                       ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTgg                                                                                                                          <  1:699334/149‑1 (MQ=255)

                       ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTgg                                                                                                                          >  2:5886801/1‑149 (MQ=255)

                       ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTgg                                                                                                                          <  2:644239/149‑1 (MQ=255)

                       ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGGACAAAGACGGCCAGCAGGGGCGGAGTgg                                                                                                                          >  1:7645657/1‑149 (MQ=255)

                        tgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                         <  2:8520416/149‑1 (MQ=255)

                         gAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGgag                                                                                                                        <  2:6263543/149‑1 (MQ=255)

                          aaCCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGgaga                                                                                                                       >  2:3552569/1‑149 (MQ=255)

                            ccACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAgg                                                                                                                     <  2:77861/149‑1 (MQ=255)

                             cACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGt                                                                                                                    >  1:6922386/1‑149 (MQ=255)

                                gTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGa                                                                                                                 >  1:2320827/1‑149 (MQ=255)

                                 tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGaa                                                                                                                <  2:3066855/149‑1 (MQ=255)

                                 tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGaa                                                                                                                >  1:843278/1‑149 (MQ=255)

                                  cATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAg                                                                                                               <  2:7376909/149‑1 (MQ=255)

                                   aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAgg                                                                                                              <  1:5759798/149‑1 (MQ=255)

                                   aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAgg                                                                                                              >  2:8181065/1‑149 (MQ=255)

                                        tATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCata                                                                                                         >  2:4491042/1‑149 (MQ=255)

                                          tCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATc                                                                                                       <  2:8635390/149‑1 (MQ=255)

                                            gggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCga                                                                                                     <  2:216073/149‑1 (MQ=255)

                                             ggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                    <  2:13861/149‑1 (MQ=255)

                                              gCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgagg                                                                                                   <  1:4055845/149‑1 (MQ=255)

                                              gCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgagg                                                                                                   >  1:4474431/1‑149 (MQ=255)

                                               cTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgagga                                                                                                  >  2:2020881/1‑149 (MQ=255)

                                                tGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgaggag                                                                                                 >  1:8941302/1‑149 (MQ=255)

                                                 gATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGgaga                                                                                                <  2:5128344/149‑1 (MQ=255)

                                                 gATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGgaga                                                                                                <  1:5368035/149‑1 (MQ=255)

                                                   ttACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATc                                                                                              <  2:7446615/149‑1 (MQ=255)

                                                       cGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAGTGGAGAGGTCGAAGGGCATATCGAGGAGCTCGGtc                                                                                          >  2:7227565/1‑148 (MQ=255)

                                                        gTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTAc                                                                                         >  2:7168664/1‑149 (MQ=255)

                                                        gTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTAc                                                                                         >  1:5498931/1‑149 (MQ=255)

                                                         ttGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAGTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACg                                                                                        >  2:6127978/1‑149 (MQ=255)

                                                          tGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACgg                                                                                       <  1:8340827/149‑1 (MQ=255)

                                                             tCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGa                                                                                    >  1:1041414/1‑149 (MQ=255)

                                                               tGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAg                                                                                  >  1:6306618/1‑149 (MQ=255)

                                                               tGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAg                                                                                  >  1:3731136/1‑149 (MQ=255)

                                                                  ccGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAgacg                                                                               >  1:157321/1‑149 (MQ=255)

                                                                  ccGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAgacg                                                                               >  1:4698714/1‑149 (MQ=255)

                                                                  ccGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAgacg                                                                               <  1:6841632/149‑1 (MQ=255)

                                                                     ttGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGacgacg                                                                            <  2:5792195/149‑1 (MQ=255)

                                                                          ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                       >  2:3804337/1‑149 (MQ=255)

                                                                          ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGGGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                       >  1:3544656/1‑149 (MQ=255)

                                                                           tGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                      >  1:2722954/1‑149 (MQ=255)

                                                                              ccATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGAcc                                                                   >  1:259554/1‑149 (MQ=255)

                                                                               cATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCg                                                                  <  2:2590946/149‑1 (MQ=255)

                                                                                 tGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgat                                                                <  2:78518/149‑1 (MQ=255)

                                                                                 tGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTCCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgat                                                                >  2:1781738/1‑149 (MQ=255)

                                                                                  gggCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatg                                                               <  2:2984851/149‑1 (MQ=255)

                                                                                   ggCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatga                                                              >  1:3133039/1‑149 (MQ=255)

                                                                                    gCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatgat                                                             <  1:4785906/149‑1 (MQ=255)

                                                                                     ccTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                            <  1:1307109/149‑1 (MQ=255)

                                                                                     ccTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                            <  1:2522936/149‑1 (MQ=255)

                                                                                     ccTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                            <  1:3478891/149‑1 (MQ=255)

                                                                                            aGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACt                                                     <  2:3354702/149‑1 (MQ=255)

                                                                                             gTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTg                                                    >  1:17629/1‑149 (MQ=255)

                                                                                              tCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTgg                                                   <  2:7618024/149‑1 (MQ=255)

                                                                                                gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgtg                                                 >  2:252216/1‑149 (MQ=255)

                                                                                                  gtagatGCCGGCCAGGATCTGCCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTc                                               >  1:5112121/6‑149 (MQ=255)

                                                                                                   tagatGCCGGCCAGGATCTGCCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCa                                              >  2:2457841/5‑149 (MQ=255)

                                                                                                    aaTTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCAc                                             <  2:4909150/149‑1 (MQ=255)

                                                                                                      ttGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTg                                           >  2:3205248/1‑149 (MQ=255)

                                                                                                        gCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACATAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGc                                         <  2:3448826/149‑1 (MQ=255)

                                                                                                           gggCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTaa                                      >  2:7359913/1‑149 (MQ=255)

                                                                                                                 aTCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGa                                >  1:4022992/1‑149 (MQ=255)

                                                                                                                    cTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgct                             >  2:1527665/1‑149 (MQ=255)

                                                                                                                      ggCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                           >  1:1223578/1‑149 (MQ=255)

                                                                                                                      ggCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                           >  1:5651794/1‑149 (MQ=255)

                                                                                                                      ggCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                           <  2:606843/149‑1 (MQ=255)

                                                                                                                       gCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgct                          <  1:2221953/149‑1 (MQ=255)

                                                                                                                        ccGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCtt                         <  2:5465756/149‑1 (MQ=255)

                                                                                                                         cGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTg                        >  2:1088087/1‑149 (MQ=255)

                                                                                                                          ggCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGa                       >  1:2260147/1‑149 (MQ=255)

                                                                                                                              tCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAg                   <  1:6104837/149‑1 (MQ=255)

                                                                                                                               cTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgc                  <  1:7923020/149‑1 (MQ=255)

                                                                                                                               cTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgc                  <  1:3252799/149‑1 (MQ=255)

                                                                                                                                tACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgcg                 <  2:6004173/149‑1 (MQ=255)

                                                                                                                                   gTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGt              >  2:4822622/1‑149 (MQ=255)

                                                                                                                                      cgcgAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCAATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCaa           >  2:6768991/1‑149 (MQ=255)

                                                                                                                                         gAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAg        <  1:7761533/149‑1 (MQ=255)

                                                                                                                                           gCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGcc      <  1:2171918/149‑1 (MQ=255)

                                                                                                                                            cTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCg     <  1:8617227/149‑1 (MQ=255)

                                                                                                                                             tGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGc    >  2:1658852/1‑149 (MQ=255)

                                                                                                                                               tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTa  <  2:4034007/149‑1 (MQ=255)

AGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTA  >  NC_002947/2384245‑2384536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`