Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 4,018,201 G→A intergenic (+144/‑36) mvaB → / → PP_mr44 hydroxymethylglutaryl‑CoA lyase/CrcZ ncRNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,018,2010GA99.7% 1351.6 / ‑6.7 359intergenic (+144/‑36)mvaB/PP_mr44hydroxymethylglutaryl‑CoA lyase/CrcZ ncRNA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (152/206);  minor base T (0/1);  total (152/207)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 359 total aligned reads displayed.

TAGGTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGGTTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGTCGACA  >  NC_002947/4018055‑4018347
                                                                                                                                                  |                                                                                                                                                  
tAGGTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGAtt                                                                                                                                                  <  2:6755690/149‑1 (MQ=255)
 aGGTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGAttt                                                                                                                                                 >  1:7785854/1‑149 (MQ=255)
 aGGTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGAttt                                                                                                                                                 >  1:3192775/1‑149 (MQ=255)
  ggTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGAtttt                                                                                                                                                <  2:874929/149‑1 (MQ=255)
  ggTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGAtttt                                                                                                                                                <  2:1204154/149‑1 (MQ=255)
    tCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCa                                                                                                                                              >  1:1979590/1‑149 (MQ=255)
    tCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCa                                                                                                                                              <  2:1147937/149‑1 (MQ=255)
    tCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCa                                                                                                                                              >  1:908703/1‑149 (MQ=255)
     cacaCGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCaa                                                                                                                                             >  2:3498481/1‑149 (MQ=255)
      acacGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCaaa                                                                                                                                            >  1:5602714/1‑149 (MQ=255)
         cGGGTGTCTCATTTGTGTGGGTGAAGTGTTAACTCTCGCACATTTCACAGCAAAATATCGGGTTAGAGGGATTCTAATAGGCAGTATTTATGGCTGGGTGGTGTCGACCTAAAATCTTAACTCATTAATTTTAATGGATTTTCTAAAGt                                                                                                                                         <  2:6318324/149‑1 (MQ=255)
          gggTGTCACACTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACTGGGAAACAACTCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGtt                                                                                                                                        <  2:189236/149‑1 (MQ=255)
           tgtgtCACATTGGTGTGGTTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCTTCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTg                                                                                                                                       <  2:420368/148‑1 (MQ=255)
           ggTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTg                                                                                                                                       >  2:386445/1‑149 (MQ=255)
           ggTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTAAAAAGTTg                                                                                                                                       >  2:8212838/1‑149 (MQ=255)
            gtgtCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTgg                                                                                                                                      <  1:2620118/149‑1 (MQ=255)
              gtCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgca                                                                                                                                    <  2:7321539/149‑1 (MQ=255)
               tCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcac                                                                                                                                   >  2:6940307/1‑149 (MQ=255)
                cacaTTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcacg                                                                                                                                  >  2:8803580/1‑149 (MQ=255)
                 acaTTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcacgc                                                                                                                                 >  1:2178610/1‑149 (MQ=255)
                 acaTTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcacgc                                                                                                                                 >  2:5948662/1‑149 (MQ=255)
                  caTTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcacgca                                                                                                                                >  1:4011440/1‑149 (MQ=255)
                   aTTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGgcacgcac                                                                                                                               <  1:1690760/149‑1 (MQ=255)
                    ttGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAATATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGAGCAAAAATCTTAACTCATTAATTTTATTGGATTTTCAAAAGTTGGCACGCAcc                                                                                                                              >  2:1290046/1‑149 (MQ=255)
                    ttGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTGTCAAAAGTTGGCACGCAcc                                                                                                                              >  2:6504672/1‑149 (MQ=255)
                      ggTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCt                                                                                                                            <  2:7400321/149‑1 (MQ=255)
                      ggTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCt                                                                                                                            <  1:2347624/149‑1 (MQ=255)
                        tgtgGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGc                                                                                                                          >  1:6433530/1‑149 (MQ=255)
                        tgtgGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTGCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGc                                                                                                                          <  1:8567609/149‑1 (MQ=255)
                            ggTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCtata                                                                                                                      <  2:2926354/149‑1 (MQ=255)
                             gTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCtctag                                                                                                                     >  2:536007/1‑148 (MQ=255)
                             gTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTatat                                                                                                                     >  1:8882404/1‑149 (MQ=255)
                              tGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATAtc                                                                                                                    >  2:8655867/1‑149 (MQ=255)
                               gAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTATAGGATTTTCAAAAGTTGGCACGCACCCTGCTATAtct                                                                                                                   >  1:848234/1‑149 (MQ=255)
                                aaGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATAtctc                                                                                                                  <  1:1761155/149‑1 (MQ=255)
                                aaGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATAtctc                                                                                                                  <  1:4560735/149‑1 (MQ=255)
                                  gtgtTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTg                                                                                                                >  2:760752/1‑149 (MQ=255)
                                  gtgtTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTg                                                                                                                <  2:7886480/149‑1 (MQ=255)
                                     ttACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTa                                                                                                             <  1:2796448/149‑1 (MQ=255)
                                     ttACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTa                                                                                                             <  1:3350821/149‑1 (MQ=255)
                                      tACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTac                                                                                                            >  2:1993028/1‑149 (MQ=255)
                                       aCCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTaca                                                                                                           <  1:6916237/149‑1 (MQ=255)
                                        ccTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTacaa                                                                                                          >  2:2959925/1‑149 (MQ=255)
                                        ccTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTacaa                                                                                                          <  2:7023468/149‑1 (MQ=255)
                                          tCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTacaaca                                                                                                        <  1:87765/149‑1 (MQ=255)
                                          tCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTacaaca                                                                                                        <  1:367304/149‑1 (MQ=255)
                                             cGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTacaacaaca                                                                                                     <  2:520600/149‑1 (MQ=255)
                                              gCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTAcaacaacaa                                                                                                    >  2:2664645/1‑149 (MQ=255)
                                                    ttCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACaaaaaaaa                                                                                              >  1:7351330/1‑149 (MQ=255)
                                                    ttCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACaaaaaaaa                                                                                              <  1:5028747/149‑1 (MQ=255)
                                                           cAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATa                                                                                       <  2:2533131/149‑1 (MQ=255)
                                                            aaaaaaTCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATAc                                                                                      <  2:5045898/149‑1 (MQ=255)
                                                             aaaaaTCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATAcc                                                                                     <  2:9038508/149‑1 (MQ=255)
                                                                  tCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATa                                                                                <  2:4934/149‑1 (MQ=255)
                                                                     ggTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATaaaa                                                                             <  2:1685400/149‑1 (MQ=255)
                                                                        aaCAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAaaca                                                                          >  1:1262061/1‑149 (MQ=255)
                                                                         aCAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAaacaa                                                                         <  2:4737119/149‑1 (MQ=255)
                                                                           aGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAacaaca                                                                       <  2:1068436/149‑1 (MQ=255)
                                                                             ggAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAgg                                                                     >  1:8037552/1‑149 (MQ=255)
                                                                                aaCAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTaa                                                                  <  2:4408027/149‑1 (MQ=255)
                                                                                  cataTCGGAAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCAAGCACACTGCTATATCTCTGGTACAACAAAAAAAATAACGCGATACCCAATAAAAACATCATGTAACg                                                                <  2:7419408/146‑1 (MQ=255)
                                                                                  cAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACg                                                                <  1:7932657/149‑1 (MQ=255)
                                                                                      tCGGCATAATTTCTGGCTGGGTGGTGTCGACAAAAAATCTTAACTAATTAATTTTAAAGTATTTTCAAAAGTTGGCACGAACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGctc                                                            <  1:2650995/149‑1 (MQ=255)
                                                                                       cGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGctct                                                           <  2:3399868/149‑1 (MQ=255)
                                                                                        ggaatattttCAGGCTGGGTGGTGTCGACCAAAAATATTAACTCATTATTTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTg                                                          <  1:1020634/142‑1 (MQ=255)
                                                                                          cAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGAc                                                        >  1:1456714/1‑149 (MQ=255)
                                                                                             aaTTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACACTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAAAGGCTCTGACATa                                                     >  2:3532888/1‑149 (MQ=255)
                                                                                              aTTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATaa                                                    <  2:3594787/149‑1 (MQ=255)
                                                                                              aTTTCAGGCTGGGTGGTGTCGACAAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATaa                                                    <  2:8461539/149‑1 (MQ=255)
                                                                                                ttCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACa                                                  >  2:6367358/1‑149 (MQ=255)
                                                                                                ttCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACa                                                  >  1:3025666/1‑149 (MQ=255)
                                                                                                      cTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGaaca                                            <  2:2268844/149‑1 (MQ=255)
                                                                                                      cTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGaaca                                            >  1:8144238/1‑149 (MQ=255)
                                                                                                       tGGGTTTTGTCTACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGaacaa                                           <  2:6172176/149‑1 (MQ=255)
                                                                                                              tgtCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCa                                    <  1:5198877/149‑1 (MQ=255)
                                                                                                               gtCGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCag                                   >  2:5516161/1‑149 (MQ=255)
                                                                                                                 cGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGTTACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCagag                                 >  2:5650661/1‑149 (MQ=255)
                                                                                                                 cGACCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCagag                                 >  1:355189/1‑149 (MQ=255)
                                                                                                                   aCCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTCCCACAACACAAAAAACGCGATACCCCATAAAAACAACAGGTAACGGCTCTGACCTAACAAGAACAACACGGCAGAGGc                               >  2:8283187/1‑149 (MQ=255)
                                                                                                                   aCCAAAAATCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGc                               >  1:4746040/1‑149 (MQ=255)
                                                                                                                      aaaaaTCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTa                            >  1:7630484/1‑149 (MQ=255)
                                                                                                                           tCTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTagcaag                       <  1:7467935/149‑1 (MQ=255)
                                                                                                                            cTTAACTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTagcaagc                      >  1:5980285/1‑149 (MQ=255)
                                                                                                                               aaCTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGa                   >  1:3741262/1‑149 (MQ=255)
                                                                                                                                 cTCATTAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAtt                 <  1:5369859/149‑1 (MQ=255)
                                                                                                                                     ttAATTTTAAAGTATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAtttttt             <  1:8629999/149‑1 (MQ=255)
                                                                                                                                     ttAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAtttttt             <  2:6541268/149‑1 (MQ=255)
                                                                                                                                     ttAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAtttttt             <  1:1499217/149‑1 (MQ=255)
                                                                                                                                      tAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAttttttt            <  2:7121289/149‑1 (MQ=255)
                                                                                                                                      tAATTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGAttttttt            <  2:5738494/149‑1 (MQ=255)
                                                                                                                                       aaTTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCGGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTg           <  1:4324742/149‑1 (MQ=255)
                                                                                                                                        aTTTTAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACCGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTgg          >  2:6114874/1‑149 (MQ=255)
                                                                                                                                          tttAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAg        >  2:4583801/1‑149 (MQ=255)
                                                                                                                                          tttAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAg        >  2:6031498/1‑149 (MQ=255)
                                                                                                                                           ttAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGt       <  1:654032/149‑1 (MQ=255)
                                                                                                                                           ttAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGt       <  1:6102480/149‑1 (MQ=255)
                                                                                                                                           ttAAAGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGt       <  1:8803580/149‑1 (MQ=255)
                                                                                                                                             aaaGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGTCg     >  2:7089834/1‑149 (MQ=255)
                                                                                                                                             aaaGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAAAGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCCTAGCAAGCAGAAATAATTGGAGTCg     >  2:149390/1‑149 (MQ=255)
                                                                                                                                               aGGATTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGTCGac   >  2:8892174/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TAGGTCACACGGGTGTCACATTGGTGTGGGTGAAGTGTTACCTCCCGCACATTTCACAGCAAAAAATCGGGTAACAGGGAAACAAATCGGCAGAATTTCAGGCTGGGTGGTGTCGACCAAAAATCTTAACTCATTAATTTTAAAGGGTTTTCAAAAGTTGGCACGCACCCTGCTATATCTCTGGTACAACAACAAAAAAAACGCGATACCCAATAAAAACAACAGGTAACGGCTCTGACATAACAAGAACAACACGGCAGAGGCGTAGCAAGCAGATTTTTTTGGAGTCGACA  >  NC_002947/4018055‑4018347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: