New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 69951023 (0.190)11 (0.130)
+AATTTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTAT
9/180 4.1 32.9% noncoding (77/77 nt) PP_t05 tRNA‑Ile
?NC_002947 699535 = 43 (0.350)noncoding (1/76 nt) PP_t06 tRNA‑Ala
Rejected: Coverage evenness skew score above cutoff.

GTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGA  >  NC_002947/699401‑699670
                                                                                                                                      |                                                                                                                                       
gTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCATACCTACCATTACATGGTTCAGCCGTAGAATACgg                                                                                                                                        <  2:88856/136‑1 (MQ=17)
  aaaaGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACgggg                                                                                                                                      <  2:38086/136‑1 (MQ=32)
  aaaaGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACgggg                                                                                                                                      >  2:2397103/1‑136 (MQ=32)
           tGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTc                                                                                                                             >  2:1584662/1‑136 (MQ=32)
            gCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCa                                                                                                                            >  2:2710706/1‑136 (MQ=32)
            gCTGTAACGCTACCATGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGACCAGACCTACCATTACATGGTTAAGCCGTAGAATACGGGGCCATAGCTCa                                                                                                                            >  2:2229362/1‑136 (MQ=12)
               gTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCt                                                                                                                         <  2:3068084/136‑1 (MQ=32)
                aaaCGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGGTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCTGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTg                                                                                                                        <  2:526884/135‑1 (MQ=12)
                 ttcGCTACACTGTTATAGGTCTGTAGCTCATTTGGTTAGAGCGCACCACTGATAAGGGTGAGGTCGGCAGTTCTAATGTGCCGAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATATCTCAGCTgg                                                                                                                       <  1:3121832/134‑1 (MQ=11)
                 aaCGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTgg                                                                                                                       <  2:1495323/136‑1 (MQ=32)
                                                                                               tGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACt                                         <  2:1426143/136‑1 (MQ=32)
                                                                                                    aGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCa                                    >  1:505287/1‑136 (MQ=32)
                                                                                                    aGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCa                                    >  1:652023/1‑136 (MQ=32)
                                                                                                        cTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAAc                                <  2:1080992/136‑1 (MQ=32)
                                                                                                         tACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACt                               >  1:2825858/1‑136 (MQ=32)
                                                                                                          aCCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACtt                              <  1:1521984/136‑1 (MQ=32)
                                                                                                                aCATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAAt                        <  2:3202426/136‑1 (MQ=32)
                                                                                                                aCATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAAt                        <  2:2271517/136‑1 (MQ=32)
                                                                                                                aCATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAAt                        <  2:1981911/136‑1 (MQ=32)
                                                                                                                aCATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAAt                        <  2:1918223/136‑1 (MQ=32)
                                                                                                                aCATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAAt                        <  2:1853972/136‑1 (MQ=32)
                                                                                                                  aTGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGa                      <  1:1478575/136‑1 (MQ=32)
                                                                                                                  aTGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGa                      <  2:748739/136‑1 (MQ=32)
                                                                                                                  aTGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGa                      <  2:2801101/136‑1 (MQ=32)
                                                                                                                  aTGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGa                      <  1:1719028/136‑1 (MQ=32)
                                                                                                                  aTGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGa                      <  2:1856100/136‑1 (MQ=32)
                                                                                                                   tGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGaa                     >  1:1829682/1‑136 (MQ=32)
                                                                                                                     gTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACa                   >  2:2527336/1‑136 (MQ=32)
                                                                                                                     gTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACa                   >  2:2701453/1‑136 (MQ=32)
                                                                                                                     gTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACa                   >  2:3024938/1‑136 (MQ=32)
                                                                                                                     gTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACa                   >  2:3034884/1‑136 (MQ=32)
                                                                                                                     gTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACa                   >  1:1660843/1‑136 (MQ=32)
                                                                                                                        cAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACAtta                >  1:2622424/1‑135 (MQ=17)
                                                                                                                        cAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTc                >  1:1424650/1‑136 (MQ=32)
                                                                                                                        cAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTc                >  1:1598617/1‑136 (MQ=32)
                                                                                                                         aGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCa               >  1:182868/1‑136 (MQ=32)
                                                                                                                         aGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCa               >  1:2956190/1‑136 (MQ=32)
                                                                                                                         aGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCa               >  1:3144028/1‑136 (MQ=32)
                                                                                                                            cGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCt            >  1:1899441/1‑136 (MQ=33)
                                                                                                                            cGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCt            <  1:2397103/136‑1 (MQ=33)
                                                                                                                            cGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCt            >  1:843659/1‑136 (MQ=33)
                                                                                                                            cGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCt            <  1:911272/136‑1 (MQ=33)
                                                                                                                                 aaTACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAAt       >  2:250795/1‑136 (MQ=34)
                                                                                                                                      ggggCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGa  >  1:2417124/1‑136 (MQ=34)
                                                                                                                                      |                                                                                                                                       
GTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGA  >  NC_002947/699401‑699670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.