| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1821027 | 0 (0.000) | 3 (0.190) | 3/276 | 1.8 | 100% | coding (748/1422 nt) | PP_1624 | group II intron‑encoding maturase |
| ? | NC_002947 | = 2072298 | NA (NA) | coding (707/1422 nt) | PP_1846 | group II intron‑encoding maturase | |||||
CCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1820985‑1821027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCG < NC_002947/2072298‑2072191 CCACGGCAGGAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCG > 2:255441/1‑150 GAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAG < 1:139484/86‑1 GAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAG > 2:139484/1‑86 CCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1820985‑1821027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCG < NC_002947/2072298‑2072191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |