New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4588022	6 (0.360)	6 (0.490)	4/210	1.1	65.2%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4588050	2 (0.160)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase

CAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4587840‑4588022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcctcttcgcgggtaaacccgctcctaccagggGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGA  <  NC_002947/4588050‑4587916                                                                                                                                                                                                                                                                                                                                CAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGTCAAGGTGAAGATCTTGCATTGATCGGGCCG                                                                                                                                                                          <  2:246403/150‑1        CGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTT                                                                                                                                                                   <  2:312463/150‑1             CGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG                                                                                                                                                              <  1:113332/150‑1             CGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG                                                                                                                                                              <  2:19043/150‑1                          GCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTTTACCCGCgaa                                                                                                                                                 <  1:194416/150‑4                             ACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                              >  2:245373/1‑150                                                           ACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                              >  1:275453/1‑120                                                           ACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                              <  2:275453/120‑1                                                                   GAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTG                                                                                                        <  2:177654/150‑1                                                                      CAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTA                                                                                                     <  1:245373/150‑1                                                                      CAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTA                                                                                                     <  1:342577/150‑1                                                                                     GCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCC                                                                                      <  2:257766/150‑1                                                                                        CCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTA                                                                                                     >  1:182578/1‑132                                                                                        CCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTA                                                                                                     <  2:182578/132‑1                                                                                                                                                                         CCGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGA  >  1:78022/1‑150                                                                                                                                                                                   CAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTC                  <  2:13311/124‑1                                                                                                                                                                                   CAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTC                  >  1:13311/1‑124                                                                                                                                                                                                                                                                                                                                CAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4587840‑4588022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcctcttcgcgggtaaacccgctcctaccagggGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGA  <  NC_002947/4588050‑4587916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.