| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5639467 = | 10 (0.600) | 3 (0.190) | 3/274 | 1.8 | 21.8% | coding (28/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5639485 = | 12 (0.750) | coding (46/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
ACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGTGGTTCGGCGACGTTGCGGCGAACCGAAAGCGCCTGGTGCGACTGTTTCACATGGCGCAGGGAAAACAACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5639621‑5639467‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGA > NC_002947/5639485‑5639624 ACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGTGGTTCGGCGACGTTGCGGCGAACCGAAAGCGCCTGGTGCGACTGTTTCACATGGCGCAGGGAAAACAACTCGGCCGTACTGCGCAGCGCAGCAAAG < 2:63165/150‑1 CATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGTGGTTCGGCGACGTTGCGGCGAACCGAAAGCGCCTGGTGCGACTGTTTCACATGGCGCAGGGAAAACAACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCT < 2:177339/150‑1 CCGTACTGCGCAGCGCAGCAAAGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAA < 1:85993/99‑1 CCGTACTGCGCAGCGCAGCAAAGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAA > 2:85993/1‑99 CAAAGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGTGCCATGCTCACCGTGCGGGTCAATGGCGTGGA > 2:197325/1‑150 ACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGTGGTTCGGCGACGTTGCGGCGAACCGAAAGCGCCTGGTGCGACTGTTTCACATGGCGCAGGGAAAACAACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5639621‑5639467‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGA > NC_002947/5639485‑5639624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |