New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 9142158 (0.480)6 (0.380) 6/274 1.1 34.6% coding (923/1743 nt) fruA PTS fructose transporter subunit IIBC
?NC_002947 = 914241 15 (0.940)coding (949/1743 nt) fruA PTS fructose transporter subunit IIBC

TTGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTG  >  NC_002947/914074‑914360
                                                                                                                                             |                                                                                                                                                 
ttGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCg                                                                                                                                           <  2:160977/150‑1 (MQ=255)
            tcgtGTTCGGGATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCgg                                                                                                                               <  1:190822/150‑1 (MQ=255)
                       aTCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcggc                                                                                                                    >  2:157178‑M1/1‑119 (MQ=255)
                           aGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcggcgata                                                                                                                <  1:157178‑M1/150‑36 (MQ=255)
                                            ggCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTg                                                                                               <  1:323670/150‑1 (MQ=255)
                                                                   gCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgata                                                                                                                <  1:123187‑M2/110‑10 (MQ=255)
                                                                   gCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgata                                                                                                                >  2:123187‑M2/1‑101 (MQ=255)
                                                                                  ggCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCt                                                         >  2:11753/1‑150 (MQ=255)
                                                                                                    gggtCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCaa                                       <  1:114571/147‑1 (MQ=255)
                                                                                                    ggTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCaa                                       <  1:308646/150‑1 (MQ=255)
                                                                                                      ttCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcgg                                                                                                                     <  1:377664‑M1/70‑31 (MQ=255)
                                                                                                      ttCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcgg                                                                                                                     >  2:377664‑M1/1‑40 (MQ=255)
                                                                                                                   aGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATg                        <  1:180871/150‑1 (MQ=255)
                                                                                                                                tGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGccc           <  2:68748/150‑1 (MQ=255)
                                                                                                                                     tATCGCCGAtcatgcccggggccagcccggggcggtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgc                                              <  1:123187‑M1/110‑102 (MQ=255)
                                                                                                                                     tATCGCCGAtcatgcccggggccagcccggggcggtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgc                                              >  2:123187‑M1/1‑9 (MQ=255)
                                                                                                                                     tATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtaggcct      <  1:157178‑M2/150‑116 (MQ=255)
                                                                                                                                         gCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtaggcctcgat  >  2:157178‑M2/1‑31 (MQ=255)
                                                                                                                                          ccGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaa                                                                                 <  1:377664‑M2/70‑41 (MQ=255)
                                                                                                                                          ccGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaa                                                                                 >  2:377664‑M2/1‑30 (MQ=255)
                                                                                                                                             |                                                                                                                                                 
TTGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTG  >  NC_002947/914074‑914360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.