| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4725869 = | 8 (0.480) | 3 (0.190) | 3/274 | 1.8 | 27.7% | coding (215/483 nt) | yigI | hypothetical protein |
| ? | NC_002947 | 4725900 = | 8 (0.500) | coding (184/483 nt) | yigI | hypothetical protein | |||||
GCGCCACAGCTGGCACTGGGCGTAGGTATCGCGAAAATGCCCGGCGCGCAGGTAGTCGATGGAAAAGTCGATGATCTTCGGAATGCTTGCGCTCTCGCTGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCGGAACAACACGTCATCGCCCTGACGCTCGCATTCGATGCCGATCA > NC_002947/4725739‑4725992 | gcgcCACAGCTGGCACTGGGCGTAGGTATCGCGAAAATGCCCGGCGCGCAGGTAGTCGATGGAAAAGTCGATGATCTTCGGAATGCTTGCGCTCTCGCTGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCAc < 2:240475/150‑1 (MQ=255) tggcgctgattccctatgccgggctgatcggcatcgaatgcgagcgtcagggcgatgacgtgttgttccgcctgccggccagcccggacaatatcggcaacccactgctaccggccaTCCATGAAGCCGGCGATCACGCCGCCatggatg > 2:329479‑M1/118‑150 (MQ=255) gAAAATGCCCGGCGCGCAGGTAGTCGATGGAAAAGTCGATGATCTTCGGAATGCTTGCGCTCTCGCTGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGc < 1:76660/150‑1 (MQ=255) tcgaatgcgagcgtcagggcgatgacgtgttgttccgcctgccggccagcccggacaatatcggcaacccactgctaccggccaTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCg > 1:101533‑M1/85‑121 (MQ=255) tcgaatgcgagcgtcagggcgatgacgtgttgttccgcctgccggccagcccggacaatatcggcaacccactgctaccggccaTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCg < 2:101533‑M1/37‑1 (MQ=255) gAAAAGTCGATGATCTTCGGAATGCTTGCGCTCTCGCTGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCga > 1:307248/1‑149 (MQ=255) tGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCGGAACAACACGTCATCGCCCTGACGCTCGCATTCGATGc > 1:313497/1‑150 (MQ=255) tGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCGGAACAACACGTCATCGCCCTGACGCTCGCATTCGATGc > 2:304218/1‑150 (MQ=255) tCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCGGAACAACACGTCATCGCCCTGACGCTCGCATTCGATGCCGATCa < 1:299916/150‑1 (MQ=255) gACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTgg < 1:202303/53‑1 (MQ=255) gACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTgg > 2:202303/1‑53 (MQ=255) | GCGCCACAGCTGGCACTGGGCGTAGGTATCGCGAAAATGCCCGGCGCGCAGGTAGTCGATGGAAAAGTCGATGATCTTCGGAATGCTTGCGCTCTCGCTGTAGATCAGCAGGTACAGCGCTGCCGACAGCTCCATGAAGCCGGCGATCACGCCGCCATGGATGGCCGGTAGCAGTGGGTTGCCGATATTGTCCGGGCTGGCCGGCAGGCGGAACAACACGTCATCGCCCTGACGCTCGCATTCGATGCCGATCA > NC_002947/4725739‑4725992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |