New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5212189 =	13 (0.780)	5 (0.340)	3/254	1.7	30.7%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5212280 =	11 (0.740)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase

CAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAG  >  NC_002947/5212043‑5212299                                                                                                                                                   |                                                                                                                ctggcacggctcagcgatgccccactgtcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCt                                                                                                              <  2:177022‑M1/4‑1 (MQ=255)    gcacggctcagcgatgccccgctgtcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCtgtg                                                                                                           >  2:277683‑M1/144‑150 (MQ=255)    gcacggctcagcgatgccccgctgtcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCtgtg                                                                                                           >  2:277664‑M1/144‑150 (MQ=255)           aGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCgg                                                                                                    <  2:203270/150‑1 (MQ=255)                     cAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGCTGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCcgc                                                                                          <  2:377923/150‑1 (MQ=255)                      ccgctgtcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCTGTGGGAGCGGGGCCGCCcgcg                                                                                         <  1:127675‑M1/25‑1 (MQ=255)                      ccgctgtcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCTGTGGGAGCGGGCCCGCCcgcg                                                                                         <  1:127678‑M1/25‑1 (MQ=255)                            tcccaggacaacctgttccactcgatgcttggcctgttgcaggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCTGTGGGAGCGGGCGCGCCCGCGAATGaa                                                                                   >  2:46837‑M1/120‑150 (MQ=255)                                 gtcACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCaa                                                                              <  2:137377/150‑1 (MQ=255)                                    aCGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGCATGAAGGCAaaac                                                                           >  1:213224/1‑150 (MQ=255)                                                                  gCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGGGGGCGCGCCCGCGCAAGAAGGCAACACGGTGTATGG‑CCCCGGGTTGGCCCGGTTcgc                                            >  1:11440/1‑150 (MQ=255)                                                                     ggtacataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCggg                                         >  2:361989‑M1/79‑150 (MQ=255)                                                                          ataccgagctctaccagcagtcgctggacatgtttgccggttgccggccttggctggcggccaagcgctgaagCCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGTGc                                    >  1:177022‑M1/74‑150 (MQ=255)                                                                           cTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGTGcc                                   <  1:221758/150‑1 (MQ=255)                                                                            tAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACg                                                                          <  1:380996/111‑1 (MQ=255)                                                                            tAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACg                                                                          >  2:380996/1‑111 (MQ=255)                                                                                aTTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCAcc                                                                                                                <  1:343431/69‑1 (MQ=255)                                                                                aTTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCAcc                                                                                                                >  2:343431/1‑69 (MQ=255)                                                                                          aGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGTGCAGTCCACCCAGTGGGAGCGGGCGCGCCCCCGAAATAACGCAACACCCTGTATGGACCCGGTGTGGCCCGGGTAC‑CCGGCGTGACCGCACCCCCAgccct                    >  1:149889/1‑146 (MQ=255)                                                                                                            aCTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCCACACGGTGGATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGgccgcccg  >  2:127675/1‑148 (MQ=255)                                                                                                            aCTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGGGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCgccag  >  2:127678/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                CAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGG‑CCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAG  >  NC_002947/5212043‑5212299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.