| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1 = | 0 (0.000) | 25 (1.500) | 21/286 | 0.0 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
| ? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– | |||||
CTGAATATCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN > NC_002947/6183713‑6183858 | cTGAATATCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctc < 1:65086‑M2/150‑12 (MQ=255) atatCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaa > 1:129114‑M2/1‑135 (MQ=255) atatCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaa > 2:327019‑M2/1‑135 (MQ=255) tCCACTGACCGACCCTTTCCAATTCCACAACACCAAGGTTGCCAGCAGCAGTAATACAATTTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtc > 2:198327‑M2/1‑132 (MQ=255) cACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcga > 2:204937‑M2/1‑130 (MQ=255) aCTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTAAGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGTCGTGCGTATTTCCATCACaactgctcctcggaagtcgac > 1:307623‑M2/1‑129 (MQ=255) accCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagt < 2:64625‑M2/150‑30 (MQ=255) accCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagt > 1:277205‑M2/1‑121 (MQ=255) ccTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtca > 1:234127‑M2/1‑119 (MQ=255) ccTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtca < 1:206077‑M2/150‑32 (MQ=255) ccACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctat > 2:355954‑M2/1‑114 (MQ=255) aCTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGACAGGCAGGCGGTTTGGCGTGCGTTTTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgt < 2:55298‑M2/150‑39 (MQ=255) tGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgact < 1:322468‑M2/150‑41 (MQ=255) acCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataat < 1:251457‑M2/150‑50 (MQ=255) aaGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttg < 2:161097‑M2/150‑53 (MQ=255) aaGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttg < 2:161106‑M2/150‑53 (MQ=255) gACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcag < 1:87456‑M2/150‑73 (MQ=255) ttGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtata > 1:102113‑M2/1‑72 (MQ=255) cagcagTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtg > 1:64625‑M2/1‑66 (MQ=255) aCCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaac > 2:206077‑M2/1‑59 (MQ=255) gAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccct < 1:215742‑M2/150‑96 (MQ=255) ccGCCCAGCGATGGAATGGGAGGCGGTTTGGCGTGCGTATTTCCATCACtactgctcctcggaagtcgaccaacaagtcagctttgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattatcccgttttcat > 2:360857‑M2/1‑49 (MQ=255) ccGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccctattcaa > 2:360852‑M2/1‑49 (MQ=255) ccGCCAAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccctattcaa > 1:330614‑M2/1‑49 (MQ=255) ggcGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccctattcaactcttcggtagtgatttccga > 1:135676‑M2/1‑28 (MQ=255) | CTGAATATCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN > NC_002947/6183713‑6183858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |