| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 164102 = | 12 (0.720) | 3 (0.180) | 3/280 | 1.9 | 22.4% | coding (1355/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta |
| ? | NC_002947 | 164137 = | 9 (0.550) | coding (1320/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta | |||||
TATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGT > NC_002947/163994‑164285 | tatCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCttg > 2:221796/1‑150 (MQ=255) caacgacgtggtcaacccggcggcgaagaacgaccccaagtcgccaatcgccggcatgccgatcctcgaagcgttcaaggccaagaccatcatcgtcaacaagcgcTCGATG‑‑‑‑‑GCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACga > 1:248545‑M1/107‑150 (MQ=255) cAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGt > 1:106053/1‑150 (MQ=255) gtCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGa < 2:106053/150‑1 (MQ=255) cTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCttgt < 1:296030/101‑1 (MQ=255) cTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCttgt > 2:296030/1‑101 (MQ=255) tGACCTTCTTGGCGTCACCGAACACCATCAGGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTg < 2:223765/150‑1 (MQ=255) gTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTc > 1:198854/1‑150 (MQ=255) cGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGttct > 2:281861/1‑150 (MQ=255) tcgtcaacaagcgctcgatggccagcggctatgccggccatcgaGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTg > 1:248545‑M2/45‑150 (MQ=255) aCAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGgcgc < 2:283386/150‑1 (MQ=255) tcgatggccagcggctatgccggcctggacaacgaGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGtt < 1:334196‑M2/78‑1 (MQ=255) tcgatggccagcggctatgccggcctggacaacgaGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGtt > 2:334196‑M2/36‑113 (MQ=255) aGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGt < 1:221796‑M2/149‑1 (MQ=255) | TATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATAGCCGCTGGCCATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGT > NC_002947/163994‑164285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |