| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 413620 | 12 (0.720) | 3 (0.190) | 3/272 | 1.8 | 20.4% | coding (2571/2934 nt) | glnE | glutamate‑ammonia‑ligase adenylyltransferase |
| ? | NC_002947 | = 413635 | 12 (0.760) | coding (2586/2934 nt) | glnE | glutamate‑ammonia‑ligase adenylyltransferase | |||||
GCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATGGTGCAATACGCCGCTTTGGCCTGGTCCCATGACCATCCGGCCATACTTCGA > NC_002947/413510‑413770 | gcggcATTCGAAGGTGTGCGCGCCAAGGTCCTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGAc < 2:361658/150‑1 (MQ=255) aGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGc > 1:99898/1‑150 (MQ=255) ggTACTGGGCCGGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCa < 1:20392/150‑1 (MQ=255) tGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATg > 2:247478/1‑150 (MQ=255) cgcgACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTAtc < 1:247478/150‑1 (MQ=255) gACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTAtcgtc < 2:240281/150‑1 (MQ=255) gACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTAtcgtc < 2:354990/150‑1 (MQ=255) cgcgGCGAGGTGAGTGAACTGCGCGCCAAGAGGCGGGACAACCTCGGTCCCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCACGCAGGATGCCGGCGGTATCGTCGATATCGAATTTCTg < 1:66821/150‑1 (MQ=255) aaaTGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATGGTGCAATACGCCGCtt > 1:71583/1‑150 (MQ=255) cgcgcCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTACGACGCCGGTGTACCCTTCGATAACAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATCGTGCAATACGCCGCTTTGccc < 2:226074/150‑1 (MQ=255) aTGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATGGTGCAATACGCCGCTTTGGCCTGGTCCCAt < 1:230126/150‑1 (MQ=255) gTACCAAGGCGACGGCTGCCggtaccgaggttgtcacgcatcttggcgcgcatttcactcacctcgccgcgcagcttttccaggtcgcgggcctggccca > 1:277622‑M2/1‑20 (MQ=255) gTACCAAGGCGACGGCTGCCggtaccgaggttgtcacgcatcttggcgcgcatttcactcacctcgccgcgcagcttttccaggtcgcgggcctggccca < 2:277622‑M2/100‑81 (MQ=255) cAAGGCGACGGCTGCCggtaccgaggttgtcacgcatcttggcgcgcatttcactcacctcgccgcgcagcttttccaggtcgcgggcctggcccagtaccttggcgcgcacaccttcgaatgccgcccccacctgcttgcaacccacca < 1:27781‑M2/150‑135 (MQ=255) aaGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATGGTGCAATACGCCGCTTTGGCCTGGTCCCATGACCATCCGGCCATACTTCGa > 2:56288/1‑150 (MQ=255) | GCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCAAGGCGACGGCTGCCGGTACCGCGGCGAACGCCTTCGACGCCGGTGTACCCTTCGATATCAAGCAGGATGCCGGCGGTATCGTCGATATCGAATTTATGGTGCAATACGCCGCTTTGGCCTGGTCCCATGACCATCCGGCCATACTTCGA > NC_002947/413510‑413770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |