| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 732787 = | 1 (0.060) | 3 (0.190) | 3/274 | 1.8 | 75.4% | coding (2324/2565 nt) | clpB | chaperone protein ClpB |
| ? | NC_002947 | 732821 = | 1 (0.060) | coding (2358/2565 nt) | clpB | chaperone protein ClpB | |||||
GAATTCATCAACCGCATCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGGCGCGCGGCCGCTGAAGCGTGCGATCCAGCGCTGGATCGAGAACCCGCTGGCGCAGCTGATTCTGGCCGGC > NC_002947/732711‑732965 | gccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAgcgc > 1:297111‑M1/77‑114 (MQ=255)gccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAgcgc < 2:297111‑M1/38‑1 (MQ=255) tCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTgg < 2:266301/150‑1 (MQ=255) gcgctccagcaggcggctgcgcaggcggccgagctggaGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGgc > 1:297111‑M2/39‑114 (MQ=255) gcgctccagcaggcggctgcgcaggcggccgagctggaGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGgc < 2:297111‑M2/76‑1 (MQ=255) cagcaggcggctgcgcaggcggccgcctgctggaGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGGCGCGCGGCCGCTGAAGCGTGCGATCCAGCGCTGGATCgaga > 1:327809‑M2/35‑150 (MQ=255) CAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACgg > 1:155232‑M1/1‑107 (MQ=255) CAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACgg < 2:155232‑M1/107‑1 (MQ=255) ctggaGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGGCGCGCGGCCGCTGAAGCGTGCGATCCAGCGCTGGATCGAGAACCCGCTGGCGCAGCTGATTCTGGCCGGc < 2:327809‑M2/145‑1 (MQ=255) | GAATTCATCAACCGCATCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCTCGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGGGTTATGACCCGGTGTACGGCGCGCGGCCGCTGAAGCGTGCGATCCAGCGCTGGATCGAGAACCCGCTGGCGCAGCTGATTCTGGCCGGC > NC_002947/732711‑732965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |