Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3415179	3415280	102	3 [1]	[1] 2	PP_3026	recombinase

GAGTATGCGAAGTCCTGGGCTGCAGCAAGGGGGCTTACGCTAGATGAGTCGCTTTCTTTGAGGGATGAGGGCCTGTCTGCATTCCACCAACGGCACATTAAACAAGGTGCCTTAGGCGTTTTCCTTCAGGCTGTTGACGAGGGGCGCATCCCGGCC  >  NC_002947/3415043‑3415198                                                                                                                                        |                     gAGTATGCGAAGTCCTGGGCTGCAGCAAGGGGGCTTACGCTAGATGAGTCGCTTTCTTTGAGGGATGAGGGCCTGTCTGCATTCCACCAACGGCACATTAAACAAGGTGCCTTAGGCGTTTTCCTTCAGGCTGTTg                      <  2:141177/136‑1 (MQ=255) gAGTATGCGAAGTCCTGGGCTGCAGCAAGGGGGCTTACGCTAGATGAGTCGCTTTCTTTGAGGGATGAGGGCCTGTCTGCATTCCACCAACGGCACATTAAACAAGGTGCCTTAGGCGTTTTCCTTCAGGCTGTTg                      <  2:449214/136‑1 (MQ=255)                     tGCAGCAAGGGGGCTTACGCTAGATGAGTCGCTTTCTTTGAGGGATGAGGGCCTGTCTGCATTCCACCAACGGCACATTAAACAAGGTGCCTTAGGCGTTTTCCTTCAGGCTGTTGACGAGGGGCGCATCccggcc  >  1:244520/1‑136 (MQ=255)                                                                                                                                        |                     GAGTATGCGAAGTCCTGGGCTGCAGCAAGGGGGCTTACGCTAGATGAGTCGCTTTCTTTGAGGGATGAGGGCCTGTCTGCATTCCACCAACGGCACATTAAACAAGGTGCCTTAGGCGTTTTCCTTCAGGCTGTTGACGAGGGGCGCATCCCGGCC  >  NC_002947/3415043‑3415198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑