New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1 =	0 (0.000)	21 (0.540)	16/264	0.6	100%	intergenic (–/+146)	–/parB	–/chromosome‑partitioning protein
	?	NC_002947	= 6183851	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–

ATATCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN  >  NC_002947/6183717‑6183858                                                                                                                                       |                                                                                         atatCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACa                                                                                         <  2:10396‑M2/136‑2 (MQ=255)        cTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctc                                                                                  <  2:982479‑M2/136‑9 (MQ=255)              gaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcgga                                                                            >  2:13117‑M2/1‑122 (MQ=255)                      ccACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgacc                                                                    <  1:305524‑M2/136‑23 (MQ=255)                              acaacaCCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaaaagtca                                                            >  2:927301‑M2/1‑106 (MQ=255)                                    ccAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctat                                                      >  1:10396‑M2/1‑100 (MQ=255)                                               agcagcagTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcata                                           <  2:209941‑M2/136‑48 (MQ=255)                                                gcagcagTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctat                                                      >  1:461546‑M2/1‑88 (MQ=255)                                                gcagcagTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctat                                                      <  2:461546‑M2/124‑37 (MQ=255)                                                   gcagTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataattt                                       >  1:439564‑M2/1‑85 (MQ=255)                                                                  gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc                        >  1:258875‑M2/1‑70 (MQ=255)                                                                  gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc                        >  1:914351‑M2/1‑70 (MQ=255)                                                                    gCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgc                      >  1:237741‑M2/1‑68 (MQ=255)                                                                    gCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgc                      >  1:325350‑M2/1‑68 (MQ=255)                                                                         cagTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcaga                 >  1:193630‑M2/1‑63 (MQ=255)                                                                         cagTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcaga                 >  1:630943‑M2/1‑63 (MQ=255)                                                                         cagTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataattagtgccgacaaaatgcgcgcaga                 >  1:505539‑M2/1‑63 (MQ=255)                                                                              ccGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtata            >  1:278145‑M2/1‑58 (MQ=255)                                                                               cGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtatag           >  1:982479‑M2/1‑57 (MQ=255)                                                                                     aaCCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtgg     >  1:209941‑M2/1‑51 (MQ=255)                                                                                        cGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAAaactgctcctcggaagtcgaccaacaagtcagctatgacttgtcataatttgtgccgacaaaatgcgcgcagagtataggggtggatt  >  2:195863‑M2/1‑48 (MQ=255)                                                                                                                                       |                                                                                         ATATCCACTGACCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN  >  NC_002947/6183717‑6183858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.