Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_002947 | 1,930,434 | Δ63 bp | [apeB] | [apeB] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_002947 | 1930434 | 1930496 | 63 | 4 [0] | [0] 4 | [apeB] | [apeB] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1930433 | 0 (0.000) | 3 (0.080) | 3/252 | 2.3 | 100% | intergenic (‑58/+47) | PP_1729/apeB | hypothetical protein/M18 family aminopeptidase |
? | NC_002947 | 1930497 = | 0 (0.000) | coding (1273/1290 nt) | apeB | M18 family aminopeptidase |
TTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTG > NC_002947/1930403‑1930627 | ggacagcaatccttttgcagtggggccatgtaacaagcatagcgcttgaccaacgaggcttgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGt < 2:732414‑M2/42‑1 (MQ=255) ggccatgtaacaagcatagcgcttgaccaacgaggcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAg > 1:603266‑M2/72‑111 (MQ=255) ggccatgtaacaagcatagcgcttgaccaacgaggcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAg < 2:603266‑M2/40‑1 (MQ=255) gcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCAAGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGCTg > 2:586977‑M2/6‑136 (MQ=255) | TTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTG > NC_002947/1930403‑1930627 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |