| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1 = | 0 (0.000) | 20 (0.620) | 12/264 | 0.9 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
| ? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– | |||||
CGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN > NC_002947/6183729‑6183858 | cgaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcgg < 1:498821‑M2/136‑14 (MQ=255) gaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcgga < 2:775030‑M2/136‑15 (MQ=255) ccACTGCCTCAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgacc < 2:53185‑M2/136‑23 (MQ=255) ccACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgacc < 2:192315‑M2/136‑23 (MQ=255) ccAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctat > 2:498821‑M2/1‑100 (MQ=255) agcagcagTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcata < 1:348866‑M2/136‑48 (MQ=255) cAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgaca < 1:658171‑M2/136‑61 (MQ=255) aaaTTGAGCCAGCAGTACCGGATATACCGCCGAGCGATGGAATGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggtagtcgaccaacaagtcagctatgtcttggcatattttgtgccgtcaa > 2:754096‑M2/1‑75 (MQ=255) gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCTTCACaactgctcctcggtagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc > 1:510995‑M2/1‑70 (MQ=255) gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc > 1:167828‑M2/1‑70 (MQ=255) gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc > 1:451001‑M2/1‑70 (MQ=255) gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc > 2:658171‑M2/1‑70 (MQ=255) gAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgc > 1:80726‑M2/1‑70 (MQ=255) gCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgc > 1:192315‑M2/1‑68 (MQ=255) gCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgc > 1:53185‑M2/1‑68 (MQ=255) gCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgc > 1:530726‑M2/1‑68 (MQ=255) ggcGGTTTGGCGTGCGTATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaactcctattcaactcttcg < 1:235989‑M2/136‑109 (MQ=255) ggcGGTTTGGCGTGCATATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaaccgctattcaactcttcg < 2:285111‑M2/136‑109 (MQ=255) tATTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgacttggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccctattcaactcttcggtagtgatttccgact > 1:775030‑M2/1‑12 (MQ=255) aTTTCCATCACaactgctcctcggaagtcgaccaacaagtcagctatgaattggcataatttgtgccgacaaaatgcgcgcagagtataggggtggattaacccctattcaactcttcggtagtgatttccgactt < 2:218209‑M2/136‑126 (MQ=255) | CGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑NNNNNNN > NC_002947/6183729‑6183858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |