New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1207790 =41 (0.210)119 (0.720) 78/164 0.6 74.5% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi 1209619 = 47 (0.280)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 205 total aligned reads displayed.

AAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATG  >  NC_000913_3_bme_pgi/1209520‑1209718
                                                                                                   |                                                                                                   
attgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaac                                                                                                     <  1:1303688‑M2/1‑1 (MQ=255)
 ttgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCg                                                                                                    <  2:2682609‑M2/2‑1 (MQ=255)
   gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGtt                                                                                                  >  1:2084624‑M2/97‑100 (MQ=255)
    ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGtt                                                                                                  >  2:1334524‑M2/96‑99 (MQ=255)
    ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGtt                                                                                                  >  1:3186124‑M2/96‑99 (MQ=255)
      caataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                               >  2:4091060‑M2/94‑100 (MQ=255)
       aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                               <  2:1786282‑M2/7‑1 (MQ=255)
          aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaa                                                                                            >  2:2113170/1‑99 (MQ=255)
           ccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaa                                                                                            >  1:683787‑M2/89‑98 (MQ=255)
            caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                         >  1:1375518‑M2/88‑100 (MQ=255)
            caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                         >  1:4114287‑M2/88‑100 (MQ=255)
             accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                        <  2:2669526‑M2/14‑1 (MQ=255)
             accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtaaccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                        <  1:3362891‑M2/14‑1 (MQ=255)
              ccaatcataaccggtatagctatgaaaccggtgcgtccgaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                        >  2:4646015‑M2/86‑99 (MQ=255)
              cATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt                                                                                         <  2:4135233/98‑1 (MQ=255)
               caatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                      <  1:1888029‑M2/16‑1 (MQ=255)
               aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATg                                                                                        >  2:2749760/1‑98 (MQ=255)
                  tcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaagaa                                                                                   <  1:627301‑M2/19‑1 (MQ=255)
                    ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                 <  2:1692736‑M2/21‑1 (MQ=255)
                    agccagccTGTTGGCGGAGTGGCCGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAt                                                                                 <  2:2642678/100‑1 (MQ=255)
                     taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATa                                                                                <  2:2129955‑M2/22‑1 (MQ=255)
                        ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACa                                                                             <  2:2974388‑M2/25‑1 (MQ=255)
                         gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACaa                                                                            <  2:1064967/100‑1 (MQ=255)
                          ggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAg                                                                           <  1:1323119‑M2/27‑1 (MQ=255)
                          ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                           <  1:3415475/100‑1 (MQ=255)
                           cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCATAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAAAACAAg                                                                           >  1:4284251/1‑99 (MQ=255)
                           cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGc                                                                          <  2:2283021/100‑1 (MQ=255)
                                gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                     <  2:238615‑M2/33‑1 (MQ=255)
                                  tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                    >  2:577407‑M2/66‑99 (MQ=255)
                                     gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                 >  1:3312067‑M2/63‑99 (MQ=255)
                                        ggCTGAAGGCCACGTAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                 >  2:1457321/1‑96 (MQ=255)
                                        ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                             >  1:3016755/1‑100 (MQ=255)
                                         gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                            >  2:2411360/1‑100 (MQ=255)
                                          cggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                           <  1:4419859‑M2/43‑1 (MQ=255)
                                           tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                          >  1:2942344/1‑100 (MQ=255)
                                           ggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                          <  1:4583117‑M2/44‑1 (MQ=255)
                                             tgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                        >  1:4240298‑M2/55‑100 (MQ=255)
                                               cgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                       <  1:4435376‑M2/47‑1 (MQ=255)
                                                gtcctaatgtagccgttgctgcatcgaattttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGcttc                                                     >  2:3642169‑M2/52‑99 (MQ=255)
                                                 tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                    <  2:1050730‑M2/50‑1 (MQ=255)
                                                  cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                   >  1:1009444‑M2/50‑100 (MQ=255)
                                                  cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                   >  1:3641004/1‑100 (MQ=255)
                                                  cACGGAACCGGGACACCAACAGGAAATTCAGAGCCTGCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAAGGCATCATTCCTGc                                                        <  2:1789819/95‑1 (MQ=255)
                                                   ctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                   <  1:3986504‑M2/51‑1 (MQ=255)
                                                   ctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                   <  2:4494746‑M2/51‑1 (MQ=255)
                                                    taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                  >  2:904096‑M2/48‑99 (MQ=255)
                                                    taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                  >  1:3718987‑M2/48‑99 (MQ=255)
                                                    cGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                  >  1:320920/1‑99 (MQ=255)
                                                      gAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                               >  1:4794037/1‑100 (MQ=255)
                                                        aCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAACGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                             <  1:3538510/100‑1 (MQ=255)
                                                         tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                            <  1:2683845‑M2/58‑1 (MQ=255)
                                                         ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTATACCAgggg                                            >  2:3873370/1‑100 (MQ=255)
                                                          agccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                            >  1:1831278‑M2/42‑99 (MQ=255)
                                                           gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                          <  2:2607060‑M2/60‑1 (MQ=255)
                                                             cgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                        <  2:2955054‑M2/62‑1 (MQ=255)
                                                               ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                      <  2:3721660‑M2/64‑1 (MQ=255)
                                                               cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                      <  2:431205/100‑1 (MQ=255)
                                                                 gctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                     >  2:2510697‑M2/35‑99 (MQ=255)
                                                                 gctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                     >  2:2260883‑M2/35‑99 (MQ=255)
                                                                 ccAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                     >  2:4143752/1‑99 (MQ=255)
                                                                 ccAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGACTTaa                                     >  2:2860741/1‑99 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                    <  1:4634738‑M2/66‑1 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   <  1:2409617‑M2/67‑1 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   <  1:33950‑M2/67‑1 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   <  2:2994780‑M2/67‑1 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:3777450‑M2/34‑100 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:4733059‑M2/34‑100 (MQ=255)
                                                                  ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGCATTTAACa                                   >  2:4597531‑M2/34‑100 (MQ=255)
                                                                  cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  2:3452547/1‑100 (MQ=255)
                                                                  cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:1506771/1‑100 (MQ=255)
                                                                     cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                 <  2:3253792‑M2/69‑1 (MQ=255)
                                                                      attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                               >  2:638249‑M2/30‑100 (MQ=255)
                                                                        tgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                             >  2:2836724‑M2/28‑100 (MQ=255)
                                                                          aaTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                           >  2:4448104/1‑100 (MQ=255)
                                                                            tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                         <  1:1750560/100‑1 (MQ=255)
                                                                             gCAGAGCCTTCTCCCAAACCAACGCTTATGAAAATGAAGAAATATCAAGCAAATGGCACCATTCATGCTTTTACCAGGGGGTTTTAACATGCTTATTg                          >  2:1299147/1‑98 (MQ=255)
                                                                              ttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                        <  2:4003274‑M2/78‑1 (MQ=255)
                                                                              cAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                        >  1:2782402/1‑99 (MQ=255)
                                                                               tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                          <  2:1137021‑M2/76‑1 (MQ=255)
                                                                               agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                      <  2:3429008/100‑1 (MQ=255)
                                                                                gctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                      <  1:1978888‑M2/80‑1 (MQ=255)
                                                                                gagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt                     <  2:3210209/100‑1 (MQ=255)
                                                                                 ctccttctcccaaacgaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATGATTCCTGCTTTTACCAGGGGGATTTAACAAGCTTATTGGCTATg                    >  2:4755254‑M2/19‑100 (MQ=255)
                                                                                 ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATg                    >  1:842637‑M2/19‑100 (MQ=255)
                                                                                      tctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTGACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc               >  2:218418‑M2/14‑100 (MQ=255)
                                                                                       ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              >  2:698762‑M2/13‑100 (MQ=255)
                                                                                       ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg                <  1:3657622‑M2/86‑1 (MQ=255)
                                                                                        tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              >  2:1834012‑M2/12‑99 (MQ=255)
                                                                                         cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCATAAGACATCATTCCTGCTTTTACCAGGGGCATCTAACATGCTTATTGGCTAt                     >  2:842089‑M2/11‑91 (MQ=255)
                                                                                         cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa            >  2:4812046‑M2/11‑100 (MQ=255)
                                                                                         cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa            >  1:2862764‑M2/11‑100 (MQ=255)
                                                                                          ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              <  1:2256123‑M2/88‑1 (MQ=255)
                                                                                          ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              <  2:1538257‑M2/88‑1 (MQ=255)
                                                                                          ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              <  1:3486026‑M2/88‑1 (MQ=255)
                                                                                          ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt           >  2:1609533‑M2/10‑100 (MQ=255)
                                                                                          ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt           >  1:2734689‑M2/10‑100 (MQ=255)
                                                                                           caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc          <  2:1448547‑M2/92‑1 (MQ=255)
                                                                                            aaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATca         <  2:3310597‑M2/93‑1 (MQ=255)
                                                                                               ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac       >  1:2616708‑M2/5‑99 (MQ=255)
                                                                                               ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac       >  1:1661769‑M2/5‑99 (MQ=255)
                                                                                                   |                                                                                                   
AAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATG  >  NC_000913_3_bme_pgi/1209520‑1209718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.