New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 2477002 =52 (1.070)19 (0.430) 15/230 2.6 32.5% coding (628/936 nt) dsdC dsd operon activator; autorepressor
?NC_000913_3_bme_pgi 2477035 = 32 (0.730)coding (595/936 nt) dsdC dsd operon activator; autorepressor

ACCAGGCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGC  >  NC_000913_3_bme_pgi/2476854‑2477144
                                                                                                                                                    |                                                                                                                                              
aCCAGGCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCg                                                                                                                                               <  4:116761/150‑1 (MQ=255)
 tcgatttggcgatctactttgatgatgcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGt                                                                                                                                              >  2:345061‑M1/148‑150 (MQ=255)
 ccAGGCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGt                                                                                                                                              <  2:133375/150‑1 (MQ=255)
   aGGCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTg                                                                                                                                            >  3:279433/1‑150 (MQ=255)
    atttggcgatctactttgatgatgcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGc                                                                                                                                           <  4:101862‑M1/6‑1 (MQ=255)
     gCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTg                                                                                                                                            >  1:509142/1‑148 (MQ=255)
     gCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTg                                                                                                                                            <  2:509142/148‑1 (MQ=255)
      cGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTc                                                                                                                                         <  3:50691/150‑1 (MQ=255)
      cGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTc                                                                                                                                         <  3:50704/150‑1 (MQ=255)
                 cATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCctgtct                                                                                                                              >  2:560093/1‑150 (MQ=255)
                  tttgatgatgcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTcc                                                                                                                                        >  2:16646‑M1/131‑139 (MQ=255)
                  tttgatgatgcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTcc                                                                                                                                        <  1:16646‑M1/9‑1 (MQ=255)
                   tCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCctgtctgt                                                                                                                            <  1:560093/150‑1 (MQ=255)
                     gatgatgcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCa                                                                                                                          <  1:291474‑M1/23‑1 (MQ=255)
                           gcgccgtcagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATTGAGc                                                                                                                    >  2:291474‑M1/122‑150 (MQ=255)
                            cAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCtgtctgtc                                                                                                                           >  1:276754/1‑142 (MQ=255)
                            cAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCtgtctgtc                                                                                                                           <  2:276754/142‑1 (MQ=255)
                             gccgtaagcgcaactcactcatcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCaa                                                                                                                  >  2:254895‑M1/120‑150 (MQ=255)
                              atattcttCATCGCGGCTATAACAGCTAAATCAGAACGATCAAAGCCAATAACAAAAGATGTCGGCAAATAAACGCCATAATGTTGCTCCCATCTATGCCATTNATCNGTACCGGAGTCGTTNCTCCATGACAGACAGGCATGGAGCAAc                                                                                                                 <  3:287803/144‑1 (MQ=255)
                                    ttCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAg                                                                                                           <  2:93823/150‑1 (MQ=255)
                                           cgGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGAcaca                                                                                                    <  2:401704/150‑1 (MQ=255)
                                           cgGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGAcaca                                                                                                    >  1:361226/1‑150 (MQ=255)
                                            ggCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATg                                                                                                                        >  4:21926/1‑129 (MQ=255)
                                            ggCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATg                                                                                                                        <  3:21926/129‑1 (MQ=255)
                                                 atcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCctgt                                                                                                                                >  1:45720‑M1/100‑116 (MQ=255)
                                                 atcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCctgt                                                                                                                                <  2:45720‑M1/17‑1 (MQ=255)
                                                  tcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  1:135284‑M1/99‑125 (MQ=255)
                                                  tcactttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  2:135284‑M1/27‑1 (MQ=255)
                                                    actttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGt                                                                                                                                              <  2:359592‑M1/3‑1 (MQ=255)
                                                    actttctgatggatgaagaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGt                                                                                                                                              >  1:359592‑M1/97‑99 (MQ=255)
                                                     aGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTAc                                                                                          >  4:208828/1‑150 (MQ=255)
                                                         aaaTCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCgtg                                                                                      >  2:457245/1‑150 (MQ=255)
                                                         aaaTCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCgtg                                                                                      >  2:457239/1‑150 (MQ=255)
                                                           aTCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGtt                                                                                    >  1:141814/1‑150 (MQ=255)
                                                                     gaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  3:194390‑M1/27‑1 (MQ=255)
                                                                     gaaatcctgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  4:194390‑M1/80‑106 (MQ=255)
                                                                      cAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  1:385783/105‑1 (MQ=255)
                                                                      cAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  2:385783/1‑105 (MQ=255)
                                                                        aaGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCAt                                                                                                                         >  3:315781/1‑100 (MQ=255)
                                                                        aaGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCAt                                                                                                                         <  4:315781/100‑1 (MQ=255)
                                                                          gCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCt                                                                     >  1:19603/1‑150 (MQ=255)
                                                                            tgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  2:519306‑M1/27‑1 (MQ=255)
                                                                            tgccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  1:519306‑M1/73‑99 (MQ=255)
                                                                             gccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCa                                                                                                                                       <  3:85079‑M1/10‑1 (MQ=255)
                                                                             gccagtatgtagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCa                                                                                                                                       >  4:85079‑M1/72‑81 (MQ=255)
                                                                              aTTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCct                                                                                                                                  >  1:24218/1‑85 (MQ=255)
                                                                              aTTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCct                                                                                                                                  <  2:24218/85‑1 (MQ=255)
                                                                                tCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGc                                                               >  1:447682/1‑150 (MQ=255)
                                                                                  cAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGAcaca                                                                                                    <  3:49282/111‑1 (MQ=255)
                                                                                  cAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGAcaca                                                                                                    >  4:49282/1‑111 (MQ=255)
                                                                                  cAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGt                                                             >  3:101862/1‑150 (MQ=255)
                                                                                  cAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGt                                                             >  3:69054/1‑150 (MQ=255)
                                                                                      tagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATg                                                                                                                                     >  2:408701‑M1/63‑74 (MQ=255)
                                                                                      tagcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATg                                                                                                                                     <  1:408701‑M1/12‑1 (MQ=255)
                                                                                       agcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAAc                                                                                                                 >  3:336239‑M1/62‑93 (MQ=255)
                                                                                       agcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAAc                                                                                                                 <  4:336239‑M1/32‑1 (MQ=255)
                                                                                          gTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCggg                                                     <  1:457239/150‑1 (MQ=255)
                                                                                          gTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCggg                                                     <  1:457245/150‑1 (MQ=255)
                                                                                            cGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCt                                                   <  2:141814/150‑1 (MQ=255)
                                                                                              gCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  1:246550/1‑81 (MQ=255)
                                                                                              gCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  2:246550/81‑1 (MQ=255)
                                                                                              gCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTAc                                                 >  1:296361/1‑150 (MQ=255)
                                                                                               cAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACa                                                >  4:303746/1‑150 (MQ=255)
                                                                                                     aaCCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTgg                                          <  3:303746/150‑1 (MQ=255)
                                                                                                       aaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTc                                                                                                                                         <  1:203370‑M1/8‑1 (MQ=255)
                                                                                                       aaagacatgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTc                                                                                                                                         >  2:203370‑M1/46‑53 (MQ=255)
                                                                                                             atgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAAc                                                                                                                 <  1:555380‑M1/32‑1 (MQ=255)
                                                                                                             atgctttaaccaacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAAc                                                                                                                 >  2:555380‑M1/40‑71 (MQ=255)
                                                                                                                gTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATttctt                               <  2:19603/150‑1 (MQ=255)
                                                                                                                 ttGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATttcttc                              <  4:69054/150‑1 (MQ=255)
                                                                                                                     gcCCAACTATGCCATTCATCCGTACCGGAGTCCTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTcatcc                          >  1:193927/1‑150 (MQ=255)
                                                                                                                       ccAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCGGTCTGTCATGGAGCAACGTACAGGGACACAGGGTAATTACCGTGGTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACAGACTGGCAGGATTTCTTcatccat                        >  4:306792/1‑150 (MQ=255)
                                                                                                                        aacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGtt                                                                                    >  3:288712‑M1/29‑89 (MQ=255)
                                                                                                                        aacacggtaattaacctgtgtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGtt                                                                                    <  4:288712‑M1/61‑1 (MQ=255)
                                                                                                                         aaCTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGTGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCa                      >  1:184666/1‑150 (MQ=255)
                                                                                                                         aaCTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCa                      >  4:100526/1‑150 (MQ=255)
                                                                                                                            tATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGaa                   <  3:100526/150‑1 (MQ=255)
                                                                                                                                          gTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGtgatga           <  1:426786/144‑1 (MQ=255)
                                                                                                                                          gTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGtgatga           >  2:426786/1‑144 (MQ=255)
                                                                                                                                          gTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGGGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATgagtgagt     >  1:439065/1‑150 (MQ=255)
                                                                                                                                           gtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      <  4:190516‑M1/27‑1 (MQ=255)
                                                                                                                                           gtcactgtaCGTTGCTCCATGCCTGTCTGTCATGGa                                                                                                                      >  3:190516‑M1/10‑36 (MQ=255)
                                                                                                                                             ccGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTgc  >  2:488241/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
ACCAGGCGTTTTCTTCCCATCGCCACCCCAATATGATTCATCGCGGCAATAACAGCTAAATCAGAACGATCAAAGCCAATTCCAGAAGATGTCGGCAAATTAACCGCATAATGTTGCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGC  >  NC_000913_3_bme_pgi/2476854‑2477144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.