New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 3653229NA (NA)124 (0.950) 96/252 0.2 96.9% intergenic (‑31/‑2) insH1/yhiS IS5 transposase and trans‑activator/pseudogene
?NC_000913_3_bme_pgi 3992704 = 4 (0.030)coding (1552/2547 nt) cyaA adenylate cyclase

Only 100 of 255 total aligned reads displayed.

ACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCC  >  NC_000913_3_bme_pgi/3992555‑3992851
                                                                                                                                                     |                                                                                                                                                   
tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc                                                                                                                                                     >  1:1269900‑M2/150‑150 (MQ=255)
tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc                                                                                                                                                     >  1:293166‑M2/150‑150 (MQ=255)
    cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTaa                                                                                                                                                 <  3:709349/150‑1 (MQ=255)
     gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAg                                                                                                                                                <  1:862280‑M2/6‑1 (MQ=255)
       gcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGga                                                                                                                                              >  1:266313‑M2/1‑148 (MQ=255)
        aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccc                                                                                                                                                    <  2:1098133‑M2/2‑1 (MQ=255)
           aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAg                                                                                                                                          >  1:925905‑M2/139‑150 (MQ=255)
             tatTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgc                                                                                                                                        >  3:313549‑M2/1‑142 (MQ=255)
             tatTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgc                                                                                                                                        >  1:1369552‑M2/1‑142 (MQ=255)
             tatTAAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTCCCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTCCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgc                                                                                                                                        >  4:175743‑M2/1‑142 (MQ=255)
             aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGga                                                                                                                                        >  4:739064‑M2/137‑150 (MQ=255)
               ttGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCCTTGTCGATTTGCCTAAGgaaggtgcga                                                                                                                                      <  3:397101‑M2/150‑11 (MQ=255)
               ttGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggt                                                                                                                                          <  4:27326‑M2/146‑7 (MQ=255)
                    tCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataag                                                                                                                                 <  2:749172‑M2/150‑16 (MQ=255)
                      tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGc                                                                                                                               <  3:74470‑M2/23‑1 (MQ=255)
                       ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGcc                                                                                                                              <  2:1494455‑M2/24‑1 (MQ=255)
                       atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                              >  2:560277‑M2/1‑132 (MQ=255)
                       atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                              >  1:570307‑M2/1‑132 (MQ=255)
                          gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGAc                                                                                                                           <  1:1002389‑M2/27‑1 (MQ=255)
                            cagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaa                                                                                                                         >  4:847016‑M2/1‑127 (MQ=255)
                                  tcagccGCTGGAATACAACCGTTTCCTGAACAAACCGGTTGCGGGGGCATGTTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttc                                                                                                                   >  3:187990‑M2/1‑121 (MQ=255)
                                    agccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                              >  4:396446‑M2/1‑119 (MQ=255)
                                          tGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctga                                                                                                           <  1:627161‑M2/150‑38 (MQ=255)
                                          tGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctga                                                                                                           <  2:69405‑M2/150‑38 (MQ=255)
                                          tGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctga                                                                                                           <  3:137680‑M2/150‑38 (MQ=255)
                                             tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggactggttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGc                                                                                                        <  4:771113‑M2/46‑1 (MQ=255)
                                                  aaCCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtca                                                                                                   <  1:1276541‑M2/150‑46 (MQ=255)
                                                    actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCtt                                                                                                 >  4:3855‑M2/98‑150 (MQ=255)
                                                      gTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                               >  2:1573803‑M2/1‑101 (MQ=255)
                                                      gTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataa                                                                                                                                  <  2:450371‑M2/115‑15 (MQ=255)
                                                      gTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataa                                                                                                                                  >  1:450371‑M2/1‑101 (MQ=255)
                                                       gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTAcc                                                                                              >  1:840523‑M2/95‑150 (MQ=255)
                                                                  taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacac                                                                                   >  1:1062865‑M2/84‑150 (MQ=255)
                                                                     tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                         >  3:516303‑M2/1‑86 (MQ=255)
                                                                         atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcac                                                                                         <  4:814690‑M2/61‑1 (MQ=255)
                                                                            gTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                         <  4:247948‑M2/150‑72 (MQ=255)
                                                                            actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGct                                                                         >  3:361283‑M2/74‑150 (MQ=255)
                                                                             tGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt                                                                        <  3:606347‑M2/150‑73 (MQ=255)
                                                                              tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACg                                                                                                                          >  1:1084574‑M2/72‑99 (MQ=255)
                                                                               catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgcg                                                                                                    >  3:271007‑M2/71‑120 (MQ=255)
                                                                               catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgcg                                                                                                    <  4:271007‑M2/50‑1 (MQ=255)
                                                                               catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTa                                                                      >  3:273368‑M2/71‑150 (MQ=255)
                                                                                   tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                  >  2:1276541‑M2/1‑72 (MQ=255)
                                                                                    ggTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                 >  1:1475712‑M2/1‑71 (MQ=255)
                                                                                     gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                                                                            >  4:500423‑M2/1‑70 (MQ=255)
                                                                                       accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgt                                                              >  2:511649‑M2/63‑150 (MQ=255)
                                                                                        tAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                             <  4:308620‑M2/134‑68 (MQ=255)
                                                                                        tAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                             >  3:308620‑M2/1‑67 (MQ=255)
                                                                                         cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                            <  3:951279‑M2/90‑1 (MQ=255)
                                                                                         cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                            <  2:729996‑M2/90‑1 (MQ=255)
                                                                                         aaCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                     <  2:1266263‑M2/109‑44 (MQ=255)
                                                                                           tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTga                                                          <  2:1354746‑M2/92‑1 (MQ=255)
                                                                                            gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTgag                                                         >  1:107810‑M2/58‑150 (MQ=255)
                                                                                            ggCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                         >  1:1575603‑M2/1‑63 (MQ=255)
                                                                                            ggCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                               <  1:1176026‑M2/128‑66 (MQ=255)
                                                                                            ggCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                               >  2:1176026‑M2/1‑63 (MQ=255)
                                                                                             gCCTGCTGACCTCGCGCACCCTTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                        >  1:1214906‑M2/1‑62 (MQ=255)
                                                                                              ccTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                       >  3:919693‑M2/1‑61 (MQ=255)
                                                                                               ctgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                      >  4:814982‑M2/1‑60 (MQ=255)
                                                                                               ctgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                      <  3:814982‑M2/118‑59 (MQ=255)
                                                                                               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTc                                                                                                                      >  1:400091‑M2/55‑86 (MQ=255)
                                                                                               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATc                                                      <  2:1062865‑M2/96‑1 (MQ=255)
                                                                                                   ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGcc                                                  <  4:596983‑M2/100‑1 (MQ=255)
                                                                                                     aCCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaa                                                                                                                         <  1:617183‑M2/77‑24 (MQ=255)
                                                                                                     aCCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaa                                                                                                                         >  2:617183‑M2/1‑54 (MQ=255)
                                                                                                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATg                                                                                                                                    <  1:1350283‑M2/18‑1 (MQ=255)
                                                                                                         cgcgCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                            >  2:363606‑M2/1‑50 (MQ=255)
                                                                                                              aCCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                       >  1:744670‑M2/1‑45 (MQ=255)
                                                                                                                aaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccg                                                                                 <  4:956497‑M2/69‑1 (MQ=255)
                                                                                                                      gatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACgtgt                                                                                                                       <  3:859521‑M2/31‑1 (MQ=255)
                                                                                                                      gatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTaa                               >  2:232350‑M2/32‑150 (MQ=255)
                                                                                                                        tctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAAcc                             >  2:950661‑M2/30‑150 (MQ=255)
                                                                                                                         tatTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                            >  2:338699‑M2/1‑34 (MQ=255)
                                                                                                                            tAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                         <  4:62103‑M2/150‑120 (MQ=255)
                                                                                                                            tAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                         >  2:768307‑M2/1‑31 (MQ=255)
                                                                                                                            atatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGa                         >  1:1433394‑M2/26‑150 (MQ=255)
                                                                                                                             tatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGccc                                                                <  1:492863‑M2/86‑1 (MQ=255)
                                                                                                                                 gTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcgtcgccat                    <  2:862623‑M2/150‑125 (MQ=255)
                                                                                                                                 gTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgggga                                                                                                                           >  2:1432116‑M2/1‑26 (MQ=255)
                                                                                                                                   ggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTATAGCCCGTGTga                                                          >  2:1346876‑M2/19‑110 (MQ=255)
                                                                                                                                   aaCGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                  >  4:538501‑M2/1‑24 (MQ=255)
                                                                                                                                    aCGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                    >  1:552795‑M2/1‑23 (MQ=255)
                                                                                                                                     acttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                            >  4:64040‑M2/17‑106 (MQ=255)
                                                                                                                                      ggCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                        >  1:319530‑M2/1‑21 (MQ=255)
                                                                                                                                       ttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                <  2:783480‑M2/70‑1 (MQ=255)
                                                                                                                                       ttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                >  1:783480‑M2/15‑84 (MQ=255)
                                                                                                                                       ttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGa              >  1:275453‑M2/15‑150 (MQ=255)
                                                                                                                                        cATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc             >  3:481811‑M2/1‑19 (MQ=255)
                                                                                                                                          ttGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                              <  2:306976‑M2/83‑67 (MQ=255)
                                                                                                                                            gTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                 <  3:973466‑M2/78‑64 (MQ=255)
                                                                                                                                            cgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGa                   >  2:922539‑M2/10‑140 (MQ=255)
                                                                                                                                             gcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGc                                           >  4:87280‑M2/9‑115 (MQ=255)
                                                                                                                                              caccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggc       >  2:425422‑M2/8‑150 (MQ=255)
                                                                                                                                              cGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt          >  4:333788‑M2/1‑13 (MQ=255)
                                                                                                                                               accttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggcg      >  3:6336‑M2/7‑150 (MQ=255)
                                                                                                                                                aTTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc     <  3:495788‑M2/150‑140 (MQ=255)
                                                                                                                                                aTTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcgg                                                                                                               >  1:704180‑M2/1‑11 (MQ=255)
                                                                                                                                                 cttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGc                                                                                                                    >  2:544926‑M2/5‑38 (MQ=255)
                                                                                                                                                    cCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCAttt                                                                                                             >  1:984293‑M2/2‑42 (MQ=255)
                                                                                                                                                     ccTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcag                                                                                                      >  2:107200‑M2/1‑6 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
ACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCC  >  NC_000913_3_bme_pgi/3992555‑3992851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.