New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 1558066	20 (1.390)	3 (0.220)	3/250	1.7	12.4%	coding (952/987 nt)	ddpD	D,D‑dipeptide ABC transporter ATPase
	?	NC_000913_3_bme_pgi	= 1558080	23 (1.660)					coding (938/987 nt)	ddpD	D,D‑dipeptide ABC transporter ATPase
Rejected: Frequency below/above cutoff threshold.

GTTCCGTAGTTTTACCAAGCCAGTTTTTACGGGCCGGGAAATTGATATGGACGTCGCGTAACGTTAATAACGTGTCAGACACTTATAACCTCCTGCTGCGGATACCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/1557957‑1558066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacaACCAGCGCTGTGCCTGTTGGTATCCGCAGCAGGAGGTTAT  <  NC_000913_3_bme_pgi/1558080‑1558041                                                                                                                                                        GTTCCGTAGTTTTACCAAGCCAGTTTTTACGGGCCGGGAAATTGATATGGACGTCGCGTAACGTTAATAACGTGTCAGACACTTATAACCTCCTGCTGCGGATACCAACAAACAGCGCTGTGCCTGTTGGTATCCGCAGCAGGAGGTTAT  <  3:77024/150‑1                                             ATATGGACGTCGCGTAACGTTAATAACGTGTCAGACACTTATAACCTCCTGCTGCGGATACCAACAACCAGCGCTGTGCCTGTTG                       >  3:80765/1‑85                                             ATATGGACGTCGCGTAACGTTAATAACGTGTCAGACACTTATAACCTCCTGCTGCGGATACCAACAACCAGCGCTGTGCCTGTTG                       <  4:80765/85‑1                                                                                                                                                        GTTCCGTAGTTTTACCAAGCCAGTTTTTACGGGCCGGGAAATTGATATGGACGTCGCGTAACGTTAATAACGTGTCAGACACTTATAACCTCCTGCTGCGGATACCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/1557957‑1558066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacaACCAGCGCTGTGCCTGTTGGTATCCGCAGCAGGAGGTTAT  <  NC_000913_3_bme_pgi/1558080‑1558041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.