New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 3319994	15 (1.040)	4 (0.290)	4/250	1.4	22.6%	coding (1620/1626 nt)	yhbX	putative EptAB family phosphoethanolamine transferase, inner membrane protein
	?	NC_000913_3_bme_pgi	= 3320009	13 (0.940)					coding (1605/1626 nt)	yhbX	putative EptAB family phosphoethanolamine transferase, inner membrane protein

GCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTGAGTCTCCTTTATAGTGTGCAATCACTTCCTCAAGCGTTTGCGG  >  NC_000913_3_bme_pgi/3319883‑3320134                                                                                                                               |                                                                                                                              gcgAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGt                                                                                                        >  4:23890/1‑150 (MQ=255)    agaAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTaaa                                                                                                     <  3:53060/150‑1 (MQ=255)                          aaCTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATaa                                                                               >  4:1138/1‑150 (MQ=255)                                         ctcctcTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATgg                                                                <  1:25168/150‑1 (MQ=255)                                                 ccGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATc                                                        <  3:69787/150‑1 (MQ=255)                                                 ccGCTTCAGGCGTGCCACAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATc                                                        >  2:86585/1‑150 (MQ=255)                                                    cTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGgggttgatgtcgaattactggcctttgttttccagattctccacctgcggcacgcctgaagcggcagaggaggg                                                     <  1:166710‑M2/150‑75 (MQ=255)                                                       cAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAAc                                                  <  3:1138/150‑1 (MQ=255)                                                              gCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAAc                                                                                                    >  2:96809/1‑93 (MQ=255)                                                              gCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAAc                                                                                                    <  1:96809/93‑1 (MQ=255)                                                                                           gCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAATCTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTg                                             <  3:50030/119‑1 (MQ=255)                                                                                           gCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTg                                             >  4:50030/1‑119 (MQ=255)                                                                                           gCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTGAGTCTCCTTTATAGTGTGCAATCACTTCCTc              >  2:137046/1‑150 (MQ=255)                                                                                                    tCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTGAGTCTCCTTTATAGTGTGCAATCACTTCCTCAAGCGTTTg     >  4:3005/1‑150 (MQ=255)                                                                                                       aCATCAACCCTGCCCTTCAGGGGTGgggttgatgtcgaattactggcctttgttttccagattctccacctgcggcacgcctgaagcggcagaggaggaaagcaggccagttttggcataaccgaaaagtttctcgcgggtatcagtgat  <  4:76732‑M2/150‑126 (MQ=255)                                                                                                                 tGCCCTTCAGGGGTGgggttgatgtcgaattactggcctttgttttccagattctccacctgcggcacgc                                                                        <  2:52382‑M2/70‑56 (MQ=255)                                                                                                                 tGCCCTTCAGGGGTGgggttgatgtcgaattactggcctttgttttccagattctccacctgcggcacgc                                                                        >  1:52382‑M2/1‑15 (MQ=255)                                                                                                                               |                                                                                                                              GCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAATTCGACATCAACCCTGCCCTTCAGGGGTGGGGTTACCTTGCTTATCCTCTGTAAACTCCTTTCTGAGCATCACATAATCGAAAACATCATGGTTTGCATCCACAACCCGTGAGTCTCCTTTATAGTGTGCAATCACTTCCTCAAGCGTTTGCGG  >  NC_000913_3_bme_pgi/3319883‑3320134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.