Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_bme_pgi	3681458	3681515	58	2 [1]	[1] 3	yhjJ	putative periplasmic M16 family chaperone

GTCAATTTGCCAGTGGCATTTGCCAGATAAGAGAGCGCTTCTTTCAGCAAATCGTTACGGTTATTGGGCAAACTCAGATTAAACAGCGTGGTGTCATAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCAC  >  NC_000913_3_bme_pgi/3681492‑3681641                         |                                                                                                                              gTCAATTTGCCAGTGGCATTTGCCAGATAAGAGAGCGCTTCTTTCAGCAAATCGTTACGGTTATTGGGCAAACTCAGATTAAACAGCGTGGTGTCATAAGGGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCcac  >  2:78856/1‑150 (MQ=255)                         aGATAAGAGAGCGCTTCTTTCAGCAAATCGTTACGGTTATTGGGCAAACTCAGATTAAACAGCGTGgtgt                                                          <  1:73150/70‑1 (MQ=255)                         aGATAAGAGAGCGCTTCTTTCAGCAAATCGTTACGGTTATTGGGCAAACTCAGATTAAACAGCGTGgtgt                                                          >  2:73150/1‑70 (MQ=255)                         |                                                                                                                              GTCAATTTGCCAGTGGCATTTGCCAGATAAGAGAGCGCTTCTTTCAGCAAATCGTTACGGTTATTGGGCAAACTCAGATTAAACAGCGTGGTGTCATAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCAC  >  NC_000913_3_bme_pgi/3681492‑3681641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑