New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 3653229NA (NA)183 (0.900) 124/246 0.3 92.5% intergenic (‑31/‑2) insH1/yhiS IS5 transposase and trans‑activator/pseudogene
?NC_000913_3_bme_pgi 3992704 = 15 (0.070)coding (1552/2547 nt) cyaA adenylate cyclase

Only 100 of 386 total aligned reads displayed.

ACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGC  >  NC_000913_3_bme_pgi/3992555‑3992853
                                                                                                                                                     |                                                                                                                                                     
aCCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGc                                                                                                                                                       <  1:1011377/150‑1 (MQ=255)
    cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTaa                                                                                                                                                   >  1:1950313/1‑150 (MQ=255)
        ccAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaa                                                                                                                                               >  1:826778‑M2/1‑147 (MQ=255)
           aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAg                                                                                                                                            >  3:795910‑M2/139‑150 (MQ=255)
             aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGga                                                                                                                                          >  3:472932‑M2/137‑150 (MQ=255)
               tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc                                                                                                                                                       <  2:1394884‑M2/1‑1 (MQ=255)
                 tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATg                                                                                                                                      >  4:779986‑M2/133‑150 (MQ=255)
                  aGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGc                                                                                                                                                       <  1:1183140/132‑1 (MQ=255)
                  aGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgc                                                                                                                                          <  2:42807‑M2/145‑9 (MQ=255)
                      gATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAGCTGGTGTCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcg                                                                                                                                 <  1:2495484‑M2/150‑18 (MQ=255)
                      gATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcg                                                                                                                                 <  2:1125647‑M2/150‑18 (MQ=255)
                       atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                                >  2:1644267‑M2/1‑132 (MQ=255)
                         catcagccatcagcCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgggg                                                                                                                              <  2:697773‑M2/150‑21 (MQ=255)
                          atcagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagc                                                                                                                                  <  1:1237624‑M2/145‑17 (MQ=255)
                          atcagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgc                                                                                                                                          >  1:641569‑M2/1‑129 (MQ=255)
                           tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttaCCTAAGTTGCAGGAGATGGTCGCCGACg                                                                                                                            >  3:872059‑M2/123‑150 (MQ=255)
                           tcagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaa                                                                                                                            >  4:1494230‑M2/1‑128 (MQ=255)
                                  tcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttc                                                                                                                     <  3:1249981‑M2/150‑30 (MQ=255)
                                      ccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcgg                                                                                                                 <  2:2155465‑M2/150‑34 (MQ=255)
                                         ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTc                                                                                                              <  1:955720‑M2/42‑1 (MQ=255)
                                          tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccc                                                                                                                                                      <  3:1361430‑M2/2‑1 (MQ=255)
                                            ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTc                                                                                                                        <  4:61404‑M2/32‑1 (MQ=255)
                                                 taACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                      >  4:1249981‑M2/1‑106 (MQ=255)
                                                           gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGca                                                                                            >  2:482904‑M2/91‑150 (MQ=255)
                                                           gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGca                                                                                            >  2:2263193‑M2/91‑150 (MQ=255)
                                                            tGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                           >  3:1373852‑M2/1‑95 (MQ=255)
                                                            cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcac                                                                                           >  4:697089‑M2/90‑150 (MQ=255)
                                                             gAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                          >  3:149582‑M2/1‑94 (MQ=255)
                                                              aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                         <  1:1272094‑M2/150‑58 (MQ=255)
                                                              aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                         >  1:697773‑M2/1‑93 (MQ=255)
                                                              aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                                <  1:51470‑M2/111‑19 (MQ=255)
                                                              aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcgg                                                                                                                                >  2:51470‑M2/1‑93 (MQ=255)
                                                                 aaaCTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                      <  3:1438055‑M2/150‑61 (MQ=255)
                                                                  taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTg                                                                                                                                               >  3:401370‑M2/84‑92 (MQ=255)
                                                                   aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACgtgt                                                                                                                         >  1:157207‑M2/83‑113 (MQ=255)
                                                                    agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccg                                                                                   >  1:1326613‑M2/82‑150 (MQ=255)
                                                                     gttgatgactcatgatgagccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGGGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                  <  4:472932‑M2/70‑1 (MQ=255)
                                                                     gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacatgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                  >  1:46968‑M2/81‑150 (MQ=255)
                                                                      ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGaa                                                                                 >  1:540584‑M2/80‑150 (MQ=255)
                                                                        gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGcc                                                                                                                                <  2:1945464‑M2/24‑1 (MQ=255)
                                                                        gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgc                                                                                                       <  1:2323636‑M2/49‑1 (MQ=255)
                                                                        gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgc                                                                                                       >  2:2323636‑M2/78‑126 (MQ=255)
                                                                           cGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                            <  1:1905291‑M2/150‑71 (MQ=255)
                                                                              tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTc                                                                                                                                   >  1:1387293‑M2/72‑92 (MQ=255)
                                                                              tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTc                                                                                                                                   <  2:1387293‑M2/21‑1 (MQ=255)
                                                                              tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacac                                                                                     >  3:578188‑M2/72‑138 (MQ=255)
                                                                                gCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                       <  4:1530647‑M2/150‑76 (MQ=255)
                                                                                gCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                       <  1:928411‑M2/150‑76 (MQ=255)
                                                                                 cATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggct                                                                                                               <  1:1087263‑M2/109‑36 (MQ=255)
                                                                                 cATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggct                                                                                                               >  2:1087263‑M2/1‑74 (MQ=255)
                                                                                  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacacc                                                                                    <  2:2027633‑M2/68‑1 (MQ=255)
                                                                                  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacacc                                                                                    >  1:2027633‑M2/68‑135 (MQ=255)
                                                                                         cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                              >  2:2096067‑M2/61‑150 (MQ=255)
                                                                                         cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                              >  2:1876339‑M2/61‑150 (MQ=255)
                                                                                         cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                              <  1:2096067‑M2/90‑1 (MQ=255)
                                                                                         aaCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                              <  4:1429777‑M2/150‑85 (MQ=255)
                                                                                          aCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                   >  4:912422‑M2/1‑65 (MQ=255)
                                                                                              ccTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattttttcatgtttgagccgattttttctcccgtaaatgc                                                         <  4:136078‑M2/150‑90 (MQ=255)
                                                                                                tgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                                 >  4:1001225‑M2/1‑59 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcacc                                                                                          >  1:1834101‑M2/53‑114 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcacc                                                                                          <  2:1834101‑M2/62‑1 (MQ=255)
                                                                                                  ctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                                                                              <  2:2537691‑M2/109‑53 (MQ=255)
                                                                                                        tCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                               <  3:676090‑M2/150‑100 (MQ=255)
                                                                                                        tCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                         <  2:1282421‑M2/140‑90 (MQ=255)
                                                                                                              acaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCg                                                                                                                       <  1:1797544‑M2/33‑1 (MQ=255)
                                                                                                              acaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCg                                                                                                                       >  2:1797544‑M2/40‑72 (MQ=255)
                                                                                                               caaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTa                                        >  2:214623‑M2/39‑150 (MQ=255)
                                                                                                                 cGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                      <  3:1099197‑M2/150‑109 (MQ=255)
                                                                                                                  acatgagctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgc                                                                                                       <  1:2538518‑M2/49‑1 (MQ=255)
                                                                                                                    atgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                       >  4:295250‑M2/34‑114 (MQ=255)
                                                                                                                    atgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                       <  3:295250‑M2/81‑1 (MQ=255)
                                                                                                                      gatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTaa                                 <  1:2263193‑M2/119‑1 (MQ=255)
                                                                                                                         ctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGc                                                                                                          >  3:1002435‑M2/29‑74 (MQ=255)
                                                                                                                          tcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTg                             <  1:214623‑M2/123‑1 (MQ=255)
                                                                                                                          atTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  2:1212704‑M2/1‑33 (MQ=255)
                                                                                                                           ttAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcag                                                                                                        <  4:1072036‑M2/74‑43 (MQ=255)
                                                                                                                           ttAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggct                                                                                                               >  2:1499369‑M2/1‑32 (MQ=255)
                                                                                                                              atcagggacttgtgcgcaccttcCCTCAGTTGCAGGAGATGGTCGCCGACGGGTCGCACCATTTCCCGCTTCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAat                         >  2:1257279‑M2/24‑150 (MQ=255)
                                                                                                                                cagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGt                                    >  3:740533‑M2/22‑137 (MQ=255)
                                                                                                                                cagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAatat                       >  3:200445‑M2/22‑150 (MQ=255)
                                                                                                                                 gTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                       >  4:1063163‑M2/1‑26 (MQ=255)
                                                                                                                                 agggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATg                      >  2:628780‑M2/21‑150 (MQ=255)
                                                                                                                                  tAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattgtttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                     >  2:2495484‑M2/1‑25 (MQ=255)
                                                                                                                                     cGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                   <  2:1606389‑M2/101‑80 (MQ=255)
                                                                                                                                      cttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCg                 >  4:1176401‑M2/16‑150 (MQ=255)
                                                                                                                                       gCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                <  2:912725‑M2/150‑131 (MQ=255)
                                                                                                                                        cATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                            >  2:304744‑M2/1‑19 (MQ=255)
                                                                                                                                          ttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAg             >  1:2166848‑M2/12‑150 (MQ=255)
                                                                                                                                            gTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta           <  1:1124210‑M2/150‑136 (MQ=255)
                                                                                                                                            gTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                       <  1:1473006‑M2/122‑108 (MQ=255)
                                                                                                                                             tCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                  <  2:835757‑M2/94‑81 (MQ=255)
                                                                                                                                               accttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggcg        <  3:1176401‑M2/144‑1 (MQ=255)
                                                                                                                                                aTTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                  <  4:1215623‑M2/107‑97 (MQ=255)
                                                                                                                                                aTTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                  >  3:1215623‑M2/1‑11 (MQ=255)
                                                                                                                                                aTTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                 <  1:2437399‑M2/60‑50 (MQ=255)
                                                                                                                                                aTGTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       >  3:1066642‑M2/1‑11 (MQ=255)
                                                                                                                                                  ttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTc     >  2:34763‑M2/4‑150 (MQ=255)
                                                                                                                                                  ttGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca     >  2:1231623‑M2/1‑9 (MQ=255)
                                                                                                                                                    cCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCg   <  1:34763‑M2/149‑1 (MQ=255)
                                                                                                                                                    cCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCg   <  1:1676712‑M2/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGC  >  NC_000913_3_bme_pgi/3992555‑3992853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.