New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 3411602166 (0.870)20 (0.120) 14/174 17.3 11.8% intergenic (+35/‑51) fis/yhdJ global DNA‑binding transcriptional dual regulator/DNA adenine methyltransferase, SAM‑dependent
?NC_000913_3_bme_pgi = 3411616 152 (0.900)intergenic (+49/‑37) fis/yhdJ global DNA‑binding transcriptional dual regulator/DNA adenine methyltransferase, SAM‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 167 total aligned reads displayed.

ATCAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCACGGT  >  NC_000913_3_bme_pgi/3411517‑3411712
                                                                                                   |                                                                                                
aTCAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGa                                                                                                  <  1:434126/100‑1 (MQ=255)
  cAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAg                                                                                                >  1:943937/1‑100 (MQ=255)
    aCCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAgcg                                                                                              <  2:631605/100‑1 (MQ=255)
    aCCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAgcg                                                                                              >  2:3292099/1‑100 (MQ=255)
     ccGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAgcgc                                                                                             >  1:1464385/1‑100 (MQ=255)
       gTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCt                                                                                           >  1:717660/1‑100 (MQ=255)
         ggTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCttt                                                                                         >  2:2245837/1‑100 (MQ=255)
          gTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCttt                                                                                         <  2:1419756/99‑1 (MQ=255)
           tACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCttttt                                                                                       <  2:477460/100‑1 (MQ=255)
           tACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCttttt                                                                                       >  1:915456/1‑100 (MQ=255)
             cGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCtttttt                                                                                      <  1:3717355/99‑1 (MQ=255)
             cGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCtttttt                                                                                      <  1:976250/99‑1 (MQ=255)
             cGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTta                                                                                     <  2:1080445/100‑1 (MQ=255)
             cGCTGCCTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCCAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTta                                                                                     <  1:3791836/100‑1 (MQ=255)
              gCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTtat                                                                                    <  2:785533/100‑1 (MQ=255)
               ntGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTta                                                                                     >  1:3528999/2‑98 (MQ=255)
               cTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTtata                                                                                   <  1:2914815/100‑1 (MQ=255)
                  cGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAGGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGgt                                                                                <  2:3266224/100‑1 (MQ=255)
                  cGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTta                                                                                     <  1:2183865/95‑1 (MQ=255)
                  cGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAg                                                                                  <  1:3254210/98‑1 (MQ=255)
                   gTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAgg                                                                                 <  1:2158435/98‑1 (MQ=255)
                   gTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGgtg                                                                               <  1:2173335/100‑1 (MQ=255)
                   gTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGgtg                                                                               >  2:2432669/1‑100 (MQ=255)
                    tAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCttttt                                                                                       <  2:429358/91‑1 (MQ=255)
                    tAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGgtgt                                                                              >  1:929685/1‑100 (MQ=255)
                      aaaaaTTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTca                                                                            >  2:2470168/1‑100 (MQ=255)
                       aaaaTTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTcac                                                                           <  1:4552666/100‑1 (MQ=255)
                       aaaaTTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTca                                                                            >  1:471512/1‑99 (MQ=255)
                        aaaTTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTcac                                                                           >  1:2310893/1‑99 (MQ=255)
                          aTTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTcaca                                                                          >  1:243994/1‑98 (MQ=255)
                           ttGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAg                                                                       >  2:3118958/1‑100 (MQ=255)
                             gAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAATAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAgg                                                                      <  1:3439384/99‑1 (MQ=255)
                             gAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAgg                                                                      >  1:2356263/1‑99 (MQ=255)
                              aaaaaaTACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAgg                                                                      >  1:1885911/1‑98 (MQ=255)
                                 aaaTACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTg                                                                 <  1:2493914/100‑1 (MQ=255)
                                 aaaTACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTg                                                                 <  2:2025533/100‑1 (MQ=255)
                                       ggCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATg                                                           <  1:2644890/100‑1 (MQ=255)
                                       ggCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATg                                                           <  1:466894/100‑1 (MQ=255)
                                       ggCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATg                                                           <  2:3654175/100‑1 (MQ=255)
                                        gCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCAt                                                            >  2:4458807/1‑98 (MQ=255)
                                        gCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCAt                                                            >  1:1608867/1‑98 (MQ=255)
                                        gCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATga                                                          <  1:1282586/100‑1 (MQ=255)
                                         cATGAACTAATTCAGGTTAGCTAAATGCTTGATCAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATgag                                                         <  2:3976965/100‑1 (MQ=255)
                                          aggAACTAATTAGGGGTAGATAAATGCGTGATTAAAAAGGCGCGACGAGGCATGGGGAAGCGCCTTTTTTATAGGTGTGACAAAGGGCGTGACCATgag                                                         <  2:1625766/97‑1 (MQ=255)
                                           tGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGaa                                                       >  2:1649998/1‑100 (MQ=255)
                                             aaCTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAAc                                                      <  1:2155719/99‑1 (MQ=255)
                                              aCTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAg                                                    <  1:4147786/100‑1 (MQ=255)
                                               cTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAgg                                                   <  1:302067/100‑1 (MQ=255)
                                               cTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAg                                                    >  1:388930/1‑99 (MQ=255)
                                                 aaTTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGAt                                                 >  2:1947896/1‑100 (MQ=255)
                                                 aaTTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGAt                                                 >  2:1411021/1‑100 (MQ=255)
                                                 aaTTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGAt                                                 >  1:1780612/1‑100 (MQ=255)
                                                  aTTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGAtg                                                >  2:4126097/1‑100 (MQ=255)
                                                  aTTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGAt                                                 <  2:1979003/99‑1 (MQ=255)
                                                       ggTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTg                                                                 >  1:1756922/1‑78 (MQ=255)
                                                       ggTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAAc                                           >  1:2615744/1‑100 (MQ=255)
                                                        gTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGa                                                                <  2:1753566/78‑1 (MQ=255)
                                                        gTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAAcc                                          <  1:4108061/100‑1 (MQ=255)
                                                        gTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAAcc                                          <  1:3194722/100‑1 (MQ=255)
                                                        gTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAAcc                                          <  1:2415286/100‑1 (MQ=255)
                                                         ttAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCg                                         <  1:23071/100‑1 (MQ=255)
                                                          tAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGCACCGa                                        >  2:4331487/1‑100 (MQ=255)
                                                           aGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGAc                                       >  2:2628966/1‑100 (MQ=255)
                                                            gCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGAcc                                      >  2:1070090/1‑100 (MQ=255)
                                                            gCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGAcc                                      >  2:3066792/1‑100 (MQ=255)
                                                            gCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGAc                                       <  2:3715703/99‑1 (MQ=255)
                                                                    cTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTgg                              <  1:2483166/100‑1 (MQ=255)
                                                                    cTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTgg                              <  2:2325745/100‑1 (MQ=255)
                                                                       gATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGACGTGAACCGACCCGGTTTGGt                             <  2:3942211/98‑1 (MQ=255)
                                                                        aTTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAAt                          >  1:2565566/1‑100 (MQ=255)
                                                                        aTTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAAt                          >  1:4583240/1‑100 (MQ=255)
                                                                         ttAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATg                         <  2:1176464/100‑1 (MQ=255)
                                                                          tAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATg                         >  1:4275852/1‑99 (MQ=255)
                                                                           aaaaaGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGa                        <  1:2480275/99‑1 (MQ=255)
                                                                            aaaaGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTGTAGGTGTCACAAAGGGAGTGACCATGCGAACAGGATGTGAACCGACCCGCGTAGGTAATg                         >  2:2748941/1‑97 (MQ=255)
                                                                            aaaaGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAg                      <  1:1032285/100‑1 (MQ=255)
                                                                             aaaGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGc                     <  1:4213933/100‑1 (MQ=255)
                                                                              aaGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGc                     >  2:2085839/1‑99 (MQ=255)
                                                                               aGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTa                   <  1:3594865/100‑1 (MQ=255)
                                                                                ggCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCt                    >  1:1450860/1‑98 (MQ=255)
                                                                                ggCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCt                    >  1:2032921/1‑98 (MQ=255)
                                                                                 gcgcTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCt                    >  2:1505988/1‑97 (MQ=255)
                                                                                 gcgcTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAg                 <  1:585315/100‑1 (MQ=255)
                                                                                  cgcTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGa                <  1:2819433/100‑1 (MQ=255)
                                                                                   ncTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGAc               >  2:2814706/2‑100 (MQ=255)
                                                                                    cTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGAc               >  2:2399524/1‑99 (MQ=255)
                                                                                    cTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGAc               >  1:2637904/1‑99 (MQ=255)
                                                                                     tACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCa             >  2:2987553/1‑100 (MQ=255)
                                                                                       cTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCat            <  1:20289/99‑1 (MQ=255)
                                                                                       cTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCat            >  2:3715761/1‑99 (MQ=255)
                                                                                       cTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCat            <  2:4174076/99‑1 (MQ=255)
                                                                                       cTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCat            >  2:4210641/1‑99 (MQ=255)
                                                                                         cGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCattat         >  2:970001/1‑100 (MQ=255)
                                                                                          ggCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCattatt        >  2:3169017/1‑100 (MQ=255)
                                                                                          ggCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCattatt        >  1:1091035/1‑100 (MQ=255)
                                                                                          agCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCattat         <  1:3547161/98‑1 (MQ=255)
                                                                                           gCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTc       <  2:1270067/100‑1 (MQ=255)
                                                                                             aTGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCAc     >  2:1693769/1‑100 (MQ=255)
                                                                                              tGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCAc     <  2:391102/99‑1 (MQ=255)
                                                                                                gggAAGCGCCTTTTTTAGAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCACgg   <  2:3832247/99‑1 (MQ=255)
                                                                                                   |                                                                                                
ATCAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAATTCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATAGGTGTCACAAAGGGAGTGACCATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCACGGT  >  NC_000913_3_bme_pgi/3411517‑3411712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.