New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	1629047 =	39 (0.850)	4 (0.090)	4/272	6.3	10.3%	intergenic (+9/‑168)	rspR/ydfZ	transcriptional repressor for rspAB/selenoprotein, function unknown
	?	NC_000913_3_bme_pgi	1629071 =	32 (0.730)					intergenic (+33/‑144)	rspR/ydfZ	transcriptional repressor for rspAB/selenoprotein, function unknown
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACTCTCACCCCGGATGGGATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/1629071‑1629047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagagTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTAT  >  NC_000913_3_bme_pgi/1629071‑1629216                                                                                                                                                                             ACTCTCACCCCGGATGGGATGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGT                                                                                                       <  1:406685/70‑1 ACTCTCACCCCGGATGGGATGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGT                                                                                                       >  2:406685/1‑70  CTCTCACCCCGGATGGGATGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAAT                       >  2:18698/1‑149   TCTCACCCCGGATGGGATGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATC                      <  1:18698/149‑1                       GAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGGGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATTAGTAAGGGGAGAACACCTAT  >  1:147239/1‑149                       GAGTCTATTCCGCCGCCTTATGGCTAATGCAGGCATCAAAAAAGATGTGAGCTTAAACAAAAACAAAAAATATTTCACTCGCCAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTTGACTGTAAATCAGAAAGGAGAAAACACCTAT  <  2:630832/149‑1                                                                                                                                                                             ACTCTCACCCCGGATGGGATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/1629071‑1629047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagagTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTAT  >  NC_000913_3_bme_pgi/1629071‑1629216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.