| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_bme_pgi | 4,235,408 | Δ1 bp | intergenic (‑2175/‑499) | lysC ← / → yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_bme_pgi | 4,235,407 | 0 | A | . | 98.5% | 586.5 / 3.0 | 135 | intergenic (‑2174/‑500) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base . (58/73); minor base G (1/1); total (60/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_bme_pgi/4235259‑4235550 | tCAATGCCTGCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGa < 2:247040/149‑1 (MQ=255) cAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGat < 1:562305/149‑2 (MQ=255) cAATGCCTTCGATCAATGCGTCGTGGAACTGGGTAAGGAACTGTCGACGGAACTTTTGCCAGTTGTATCCGGCAAGGAAGGGGCGACAGGACGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGat < 1:1180/149‑2 (MQ=255) cAATGCCTACGAGCAATGGGGCGTCGAACTGGGTAAGGCACGGGCGATGCAACTTTTGCATGGTCGATCTGGCAAGGAAGGGGCTAGTGTTCGAGACGCTTCCACGCAAGGGCTTGTCGCTCATCTGCATG‑CTCGAAGGAAAGCTTGat < 2:35551/149‑2 (MQ=255) aTGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGatca > 2:122075/1‑146 (MQ=255) gCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAAGAAAGCTTG‑atcatc > 1:22232/1‑149 (MQ=255) ccTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCAtcg < 1:258525/149‑1 (MQ=255) cTTCGAGCAATGGTGCGTGGAACTGGGTACTGACGTGGTAACTTTGCTTTTGCCGGTTTGATCGGGCAAGGAAGGGGCGAGTGGTCGCGCCGATTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCAtcgt < 2:572855/149‑1 (MQ=255) cGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGa < 1:462849/149‑1 (MQ=255) tattaaTGGGGCGAGGAACGGGGAAAGGAACTGGAGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGat < 1:82285/145‑1 (MQ=255) gATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGGATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGat < 1:318103/149‑1 (MQ=255) aTCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGata > 1:53983/1‑149 (MQ=255) aaTGGGGGCTGGAAATGGGGAAGGAACCGGCGAAGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGt < 1:284905/149‑1 (MQ=255) aaTGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAGGGGGCGAGTGGTCGCGACGGTGCCACGCAAGGGCTTGTCGCGCAAATGCATG‑CGCGAAGGAAAGCTTG‑ATCAACGTCGATATGt > 2:136557/1‑149 (MQ=255) aTGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTa > 2:566133/1‑149 (MQ=255) gCGGGGAACTTGGAAAGTATATGGCGACGGAACTTTTGCTGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCg < 1:72324/149‑1 (MQ=255) gTGGCACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGACGAGGCGGGTGGTAGCGACGCTCTCACGCAAGGGCTTGTCGCGCATCTGAGAG‑CGCGAAGGGACGCTTG‑ATCATCGTCGATATATAgacacga > 2:366698/1‑143 (MQ=255) cTGGGTAATGAGCTGTCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGc < 1:135311/149‑1 (MQ=255) gggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGt < 2:53983/149‑1 (MQ=255) ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt > 1:551019/1‑149 (MQ=255) ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt < 1:449376/149‑1 (MQ=255) ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACACTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGACCGGATAAGGCGtt > 1:224408/1‑149 (MQ=255) aaGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAc < 2:297402/149‑1 (MQ=255) aGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa > 2:334280/1‑139 (MQ=255) aGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa < 1:334280/139‑1 (MQ=255) ggAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc < 2:548240/149‑1 (MQ=255) acttgtgACGGAATGTTTGCCGTTTGGTACGGGAAAGGAAGGGGCGAGTGGTCGCTACGCTTCCACGCAAGGGCTTGTCGCGCATTTGTATG‑CGCGGAGGATAGCTTG‑ATCATCGTCGTTATGTTGGCCGGATAAGGCGTTCAcgccgc < 2:219763/143‑1 (MQ=255) tGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt < 2:335947/139‑1 (MQ=255) tGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt > 1:335947/1‑139 (MQ=255) ggCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc > 2:321811/1‑149 (MQ=255) cGACTGAACTTCTGCCGGTTTTGTCGGGGAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGTTATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg < 2:43771/149‑1 (MQ=38) aCGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:495710/1‑149 (MQ=255) cTTTTGCCGGTTGTATGGGGCAAGGAAGGGGCGTGTGGTCGCGACGCTTCCACGTAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa < 2:142682/149‑1 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt < 1:320360/149‑1 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt > 1:378648/1‑149 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt > 1:501516/1‑149 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAACGAt > 2:344214/1‑149 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGAAGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa < 2:474864/148‑1 (MQ=255) ttttGCCGGTTGTATCGGGAAAGGAAGGGGCGAGTGGTCGCGACGCTTCCAAGCAAGGGCATGACGCGAGTCTGCATG‑CGCGAAGGACAGCTTGCA‑CATCGTCGATATGTGAGCCGGATCAGGCGTTGAGGCCGTATCCGGCAACCGAt > 2:321876/1‑149 (MQ=255) ttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc < 2:49932/149‑1 (MQ=255) gCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGGAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt < 1:397350/149‑1 (MQ=255) ttGTATCGGGCAAGCAAGGGGCGAGTGGTCGCTACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc < 1:368278/149‑1 (MQ=255) tATCGGTCAAGGAAGGGGCGAGTGGTCGCGACTCTTCCACGCCAGGGCTTGTCGCGCATCTGAATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc < 2:152002/149‑1 (MQ=38) aTCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg < 1:293925/149‑1 (MQ=255) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCCTCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAAGCgg > 1:267519/1‑149 (MQ=255) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg > 1:307472/1‑149 (MQ=255) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg > 1:191529/1‑149 (MQ=255) ggaaaagaaggGGCTAGTGGTCGATACGCTTCCACGTAAGGGTTTGTCGCTTATCTGCATG‑CGAGAAGGAAAGCTTG‑ACCAACCTCGAGATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt < 1:201875/143‑1 (MQ=21) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt > 1:196097/1‑149 (MQ=255) caaacgaaggCGCGATCGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGAGAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTc < 2:75639/144‑1 (MQ=38) ggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGGCGCGt < 2:551019/149‑1 (MQ=255) gaaggGGCGAGTGGTCGCGACGCTTCCACGCANGGGCTTNTCGCGCATNTGCATG‑CGCGAAGGAAAGCTT‑NATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc < 1:329032/149‑1 (MQ=255) ggggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa > 1:501490/1‑149 (MQ=255) gggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAt < 1:495710/149‑1 (MQ=255) gCGAGTGGTCGCGACTTTCCCACGTAAGGGCTTGTCGCGTTTCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATCTAGGCCGGATAAGGCGTTCACGCCGTATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa < 1:456060/149‑1 (MQ=37) ggAGTGGTCGCGACGCTTCCACGCAAGTGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGTTATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg < 1:99959/148‑1 (MQ=255) ggTGGTCGCGACGCCTCCACGCAAGGGCTTGGCGCGGCTCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc < 2:477649/148‑1 (MQ=37) aGTGGTCGCTACGTGTCCACGCAAGTGCTTTTCGCGCATGTGCATG‑CGGAAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc < 1:114449/149‑1 (MQ=25) gTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCCGATGCGACGCGGTCGCGTCTTATCAGGcc < 1:497433/149‑1 (MQ=255) ggtgcgAAGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc < 1:366575/146‑1 (MQ=255) gTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGGCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc > 1:6549/1‑149 (MQ=255) tCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc < 1:526416/124‑1 (MQ=255) tCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc > 2:526416/1‑124 (MQ=255) cgcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg < 1:61709/149‑1 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAgg > 2:161920/1‑84 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAgg < 1:161920/84‑1 (MQ=255) ttgcttttCCACGCAAGGGCTTGTTGCCGAGCGGGATG‑CGCGAAGGAGAGC‑CGCATCATCGTCGATATGTAAGCCAGAGAATGCTTTCACGCCGCATCCGGCAACCGATGCTTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt < 2:436854/143‑1 (MQ=18) cGCTTCCACGCAAGGGGTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa < 2:20300/149‑1 (MQ=255) cTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg < 2:199792/149‑1 (MQ=255) ttCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCTCCGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc < 2:337826/149‑1 (MQ=255) ttCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAAGTAAGC‑TGGATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGATCGATGc > 1:143015/1‑149 (MQ=25) tCCACGCAAGGGTTTGTCGCGCATCTGCTTGTTGCTCA‑GAAA‑CCTGGATCTTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc < 1:315591/149‑1 (MQ=18) ccACGCAAGGGCTTTTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg < 1:288393/149‑1 (MQ=255) caagCAAGGGTTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGa < 1:421095/146‑1 (MQ=255) aCGCAAGGGTTTTTCGGGTATCTGCATG‑CGCGAATGAAAGCTTG‑TTCATCGGCGAGATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGat < 1:274317/149‑1 (MQ=21) aCGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGat < 1:163264/149‑1 (MQ=255) gCAAGGGTTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCACCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 1:569892/149‑1 (MQ=255) gCAAGGGGTTGTCCCGCATTTGCATG‑GTCGGACGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTTACGTCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 1:12749/149‑1 (MQ=21) gCAAGGGCTTGTCGCGCATCTGTATG‑CGGGAAGGAAAGCGTG‑ATCACCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 1:233517/149‑1 (MQ=25) gCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 1:363514/149‑1 (MQ=255) gCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑CTCAGCTACGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGCTAGGTACAt > 1:294379/1‑149 (MQ=25) ttGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCg > 2:447318/1‑149 (MQ=255) tCGCGCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAACGTAt > 1:521094/1‑149 (MQ=255) cgcgCATCTGCATG‑CGCGATGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAATGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAtt < 1:566638/149‑1 (MQ=255) cgcgCATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGat > 1:256795/1‑42 (MQ=255) gcgcATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCAATGCCGATATGTACAACGTATTc > 1:62546/1‑149 (MQ=255) gcgcATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTAGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTTCATCGTATTc > 1:18431/1‑149 (MQ=255) cgcATCTGCATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCg < 2:294379/149‑1 (MQ=255) cATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAt < 2:11978/102‑1 (MQ=255) cATG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAt > 1:11978/1‑102 (MQ=255) aTG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt > 1:349272/1‑149 (MQ=255) aTG‑CGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt < 1:365928/149‑1 (MQ=255) g‑cgcGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATAc > 1:1754/1‑149 (MQ=255) gcgAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACAt > 2:242994/1‑149 (MQ=255) gAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAg < 1:122075/149‑1 (MQ=255) ggAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCAc > 1:291574/1‑149 (MQ=255) gAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATTTACATCGTATTCGGCAATTAATACATAGCACg > 1:302161/1‑149 (MQ=255) gAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACg > 2:72309/1‑149 (MQ=255) aaGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACgat < 2:366900/149‑1 (MQ=255) aGCTTG‑ATCATCTTCTATATGTCGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAACCGATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAGGTCGATGCCTATATGTACATCGTATTCGGCAATTAATACATAGCACgatt < 2:535401/149‑1 (MQ=21) | TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATG‑CGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_bme_pgi/4235259‑4235550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |