| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | 4131727 = | 134 (3.990) | 4 (0.130) | 4/262 | 4.0 | 3.1% | coding (1893/2433 nt) | metL | Bifunctional aspartokinase/homoserine dehydrogenase 2 |
| ? | NC_000913_3_bme_pgi | 4131773 = | 128 (4.070) | coding (1939/2433 nt) | metL | Bifunctional aspartokinase/homoserine dehydrogenase 2 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACGCGCCAGAATCACCAGCTTGCGCATCACGTCTTTGCCAGAGAGATCGTCACGCGGGTCAGGTTCGGTTAAGCCCTGCTGCCACGCCTGATCCACCAGCTCGGTAAACGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_bme_pgi/4131881‑4131727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtgccgTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGT > NC_000913_3_bme_pgi/4131773‑4131918 CACGCGCCAGAATCACCAGCTTGCGCATCACGTCTTTGCCAGAGAGATCGTCACGCGGGTCAGGTTCGGTTAAGCCCTGCTGCCACGCCTGATCCACCAGCTCGGTCACCGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGC > 2:75773/1‑149CACGCGCCAGAATCACCAGCTTGCGCATCACGTCTTTGCCAGAGAGATCGTCACGCGGGTCAGGTTCGGTTAAGCCCTGCTGCCACGCCTGATCCACCAGCTCGGTAAACGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGC > 1:555123/1‑149 GCCAGAATCACCAGCTTGCGCATCACGTCTTTGCCAGAGAGATCGTCACGCGGGTCAGGTTCGGTTAAGCCCTGCTGCCACGCCTGATCCACCAGCTCGGTAAACGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCC < 2:192339/149‑1 ACGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTG > 1:36294/1‑149 GCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCG > 2:568947/1‑149 TGCAGGAACAGCCAGGAGAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAA < 1:568947/149‑1 GAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCTGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGG < 2:376131/149‑1 AGCGGGCCGTTTACCGGGCTGGTGGATCAGGCGGGTCAGTAGGGCTTAACCGAACCTGACCCGCGTAACGATCTCTCTGGCGAGGGTTTGATTCGCAAGCTGGTGATTCTGGCGCGTTAAGCAGGTTACAACATCGAACCGGATCAGGT < 2:545373/149‑1 GCGTGCCGTTTACCGAGTTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGTACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTA < 2:186603/149‑1 tGTGGCGTTTAACGAGCTGGTGGATCATGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGCCGCGTGAAGCAGGGTACAACATCGAACCGGATCAGGTAC < 1:296846/148‑1 CGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGTGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTAC < 2:496924/149‑1 CGTGCCGTTGTCCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTAC < 1:16416/149‑1 TGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGT > 1:328432/1‑149 TGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGT < 1:507197/113‑1 TGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGT > 2:507197/1‑113 CCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGGGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGT < 2:525534/149‑1 CACGCGCCAGAATCACCAGCTTGCGCATCACGTCTTTGCCAGAGAGATCGTCACGCGGGTCAGGTTCGGTTAAGCCCTGCTGCCACGCCTGATCCACCAGCTCGGTAAACGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_bme_pgi/4131881‑4131727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtgccgTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGT > NC_000913_3_bme_pgi/4131773‑4131918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |