New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	783845 =	44 (1.310)	5 (0.160)	5/266	3.7	10.9%	coding (680/720 nt)	pnuC	nicotinamide riboside transporter
	?	NC_000913_3_bme_pgi	783878 =	40 (1.250)					coding (713/720 nt)	pnuC	nicotinamide riboside transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTG  >  NC_000913_3_bme_pgi/783706‑783989                                                                                                                                            |                                                                                                                                                 tATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCGTGTCGCTGCAGTACACCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACg                                                                                                                                         <  1:504478/149‑1 (MQ=255)     tgGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGGGaa                                                                                                                                     >  1:402202/1‑149 (MQ=255)          aaCTGGCTGTTGTGGGTGATTATTATCGTGATTAGCGTCGTTATTTTTGTTGTTCGAGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAgg                                                                                                                                <  1:113322/149‑1 (MQ=255)           aCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGc                                                                                                                               <  1:388987/149‑1 (MQ=255)            cTGGCTGTTCTGGGTGATTATTAACGTTATTAGCGTCGTTACTTTTTCACTTCAGGGCGTTTACGCCATCTCTCTGGAGTACATCATCCTCACCTTTATTGCCCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCt                                                                                                                              <  2:262205/149‑1 (MQ=255)              ggCTGTTGTTGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCa                                                                                                                            <  1:73105/149‑1 (MQ=255)                        ggTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCttt                                                                                                                  >  1:234025/1‑147 (MQ=255)                        ggTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGt                                                                                                                  <  1:419636/149‑1 (MQ=255)                          tGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTcc                                                                                                                >  1:400890/1‑149 (MQ=255)                              gattaACGTGATTATCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCAtt                                                                                                            <  1:348928/148‑1 (MQ=255)                                   aCGTGATTAGCGTCGTTATTTTTGCACTTCATGGCGTTTACGCCATGTATCTGGAGTACATCATTCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATgg                                                                                                       <  1:159874/149‑1 (MQ=255)                                    cGTTATTAGTGTCGTTATTTTTGCACTTCAGGGCGTTTACGTCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGt                                                                                                      <  2:378309/149‑1 (MQ=255)                                     gTGATTAGCGTCGTCATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAgtggtg                                                                                                     <  2:589603/149‑1 (MQ=255)                                            gCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGAtgt                                                                                              <  2:453816/149‑1 (MQ=255)                                                    aTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGcc                                                                                      >  1:77750/1‑149 (MQ=255)                                                        ttGCACTCCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTGAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGTCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGac                                                                                  <  1:462131/149‑1 (MQ=255)                                                           cACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACAcc                                                                               >  1:489325/1‑149 (MQ=255)                                                            aCTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAAACAccc                                                                              >  2:101468/1‑149 (MQ=255)                                                             tcttaGGGCGTGTGAGCCACGTCTCTGGAGTACAGCATCCTGGCCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGTGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTTAATGGCCAGACAcccc                                                                             <  1:92210/145‑1 (MQ=255)                                                              ttCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGACCAGACACCCCt                                                                            >  1:459284/1‑149 (MQ=255)                                                                       tttACGCTATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAgg                                                                   <  2:31638/149‑1 (MQ=255)                                                                        tgaCGCCATGTTTCTGGAGTACATTATCCTGACCTTTATTTCGCTCAACGGCAGACGGATGTGGATTAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCCTCATTCAGGt                                                                  <  1:203515/147‑1 (MQ=255)                                                                           cGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCGGACACCCCTTCATTCAGGTGGc                                                               >  1:428167/1‑149 (MQ=255)                                                                               aTGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCt                                                                                                                              <  1:8763/82‑1 (MQ=255)                                                                               aTGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCt                                                                                                                              >  2:8763/1‑82 (MQ=255)                                                                                   ctctGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGc                                                       <  1:20176/149‑1 (MQ=255)                                                                                    tctGGAGTACATCATCCGGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGATGATGAAGTGAATGGCCAGACACCCCTTCATTCAGGTGTCAGTCTGGcc                                                      >  1:388114/1‑149 (MQ=255)                                                                                      tGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCa                                                    <  2:60277/149‑1 (MQ=255)                                                                                              atcatcCTGACCTTTATTGCGCTCAACGGCAGCCGTATGTGGATCAACAGCGCACGTGAAAAAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAgg                                            >  2:522680/1‑149 (MQ=255)                                                                                              atcatcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAgg                                            <  1:370132/149‑1 (MQ=255)                                                                                                     tGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGGTGATTTGAATGGCCAGACACCCCTTCATTCAGGTAGCAGACTGGGCCATGACCAGGGTGatat                                     >  2:344108/1‑149 (MQ=255)                                                                                                     agACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGatat                                     >  2:454037/2‑149 (MQ=255)                                                                                                         cTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCa                                 >  2:394913/1‑149 (MQ=255)                                                                                                              ttGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGa                            <  2:311521/149‑1 (MQ=255)                                                                                                                  gcTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAAtgg                        <  1:394913/149‑1 (MQ=255)                                                                                                                  gcTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAAtgg                        >  1:469074/1‑149 (MQ=255)                                                                                                                      aaCGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGc                    >  1:439895/1‑149 (MQ=255)                                                                                                                                 gATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCt         <  1:365891/149‑1 (MQ=255)                                                                                                                                 gATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCt         <  2:489325/149‑1 (MQ=255)                                                                                                                                 gATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCt         <  1:365884/149‑1 (MQ=255)                                                                                                                                     tgGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATa     <  2:469074/149‑1 (MQ=255)                                                                                                                                     tgGACCAACAGCGCAGGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCGTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATTGTGGCGTGCTCAATCTGATa     <  2:17454/149‑1 (MQ=255)                                                                                                                                      ggATCAACAGCGCACGTGAAAGCGGCTCACGCGCGCTGTCCCATTGATGGTGATGATGTGAATGGCCCGGCTAAACTTCATTTTGTTCGTAGTCTAGATCATTAGAAGGCTTATCGTCTATCAGATTTGTGGCGTGATCAATCTCAtta    >  2:52378/1‑147 (MQ=255)                                                                                                                                        aTCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTg  >  1:52869/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                 TATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTG  >  NC_000913_3_bme_pgi/783706‑783989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.