New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 120780528 (0.110)148 (0.730) 80/164 0.9 85.5% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi = 1209602 27 (0.130)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 475 total aligned reads displayed.

CACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTG  >  NC_000913_3_bme_pgi/1207706‑1207904
                                                                                                   |                                                                                                   
cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                     <  2:2164177‑M1/100‑1 (MQ=255)
 aCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGc                                                                                                    <  2:4049012‑M1/100‑2 (MQ=255)
  catagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                   >  1:5328392‑M1/83‑100 (MQ=255)
  catagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                   >  2:3845313‑M1/83‑100 (MQ=255)
  cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct                                                                                                   >  1:5776632‑M1/1‑98 (MQ=255)
    tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGc                                                                                                  <  2:2558978‑M1/19‑1 (MQ=255)
       cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgca                                                                                              <  1:5629538‑M1/100‑8 (MQ=255)
          gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                           <  1:1224861/100‑1 (MQ=255)
           taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                           <  1:4947408‑M1/26‑1 (MQ=255)
           taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                          >  1:3959474‑M1/74‑100 (MQ=255)
           ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                          >  2:579452‑M1/1‑89 (MQ=255)
             gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacct                                                                                        >  1:4461885‑M1/1‑87 (MQ=255)
              gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                       <  1:4887641‑M1/30‑1 (MQ=255)
               catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                      >  1:1125778‑M1/70‑100 (MQ=255)
               catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                      >  1:5884263‑M1/70‑100 (MQ=255)
               catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                       <  2:1005605‑M1/30‑1 (MQ=255)
                gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                     >  2:3302998‑M1/1‑84 (MQ=255)
                 ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                     <  1:450440‑M1/99‑17 (MQ=255)
                 tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                    <  2:3015709‑M1/33‑1 (MQ=255)
                  gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                    <  2:777974‑M1/33‑1 (MQ=255)
                   ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                                   >  2:397234‑M1/66‑99 (MQ=255)
                   aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                   <  1:364948‑M1/99‑19 (MQ=255)
                   aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                   <  1:2652277‑M1/99‑19 (MQ=255)
                      aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACg                                                                               >  2:2772531‑M1/63‑100 (MQ=255)
                         ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGACGGAGCACTACTCTATGCAGCAACGGc                                                                             <  2:2723183‑M1/40‑1 (MQ=255)
                          cccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                            >  2:2343484‑M1/59‑99 (MQ=255)
                          aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                           <  2:2041323‑M1/100‑27 (MQ=255)
                          aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                           <  2:5686180‑M1/100‑27 (MQ=255)
                            gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                         <  1:5148249‑M1/100‑29 (MQ=255)
                            cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                         >  1:874943‑M1/57‑100 (MQ=255)
                            cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                         >  2:2872642‑M1/57‑100 (MQ=255)
                                  gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg                                                                   <  1:354817‑M1/100‑35 (MQ=255)
                                   tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                                                  <  2:3621714/100‑1 (MQ=255)
                                     agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGGAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                 <  2:4683195‑M1/52‑1 (MQ=255)
                                     agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                >  2:3669219‑M1/48‑100 (MQ=255)
                                      ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                 <  2:646621‑M1/98‑37 (MQ=255)
                                       gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                               <  1:1028180‑M1/99‑39 (MQ=255)
                                       caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                              <  2:88016‑M1/55‑1 (MQ=255)
                                       caggaatgatgccatttgcttgttatttcttcattctcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                              <  2:4495991‑M1/55‑1 (MQ=255)
                                         ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                            <  2:1305186‑M1/57‑1 (MQ=255)
                                           tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                          <  1:6063367‑M1/100‑44 (MQ=255)
                                           tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                          <  2:1067178‑M1/100‑44 (MQ=255)
                                           tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                          <  2:1415930‑M1/100‑44 (MQ=255)
                                            atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                         >  2:5285648‑M1/41‑100 (MQ=255)
                                             tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccac                                                        >  1:1333339‑M1/1‑55 (MQ=255)
                                             tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                          <  2:1123284‑M1/98‑44 (MQ=255)
                                             tCAAATCGGATGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                          <  2:5081840‑M1/98‑44 (MQ=255)
                                              cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                       >  1:861077‑M1/1‑54 (MQ=255)
                                              cAAATCAGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                       >  1:1969576‑M1/1‑54 (MQ=255)
                                               aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactc                                                      >  2:3090743‑M1/1‑53 (MQ=255)
                                               aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccact                                                       <  1:728355‑M1/99‑47 (MQ=255)
                                               aaaGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcca                                                         <  2:419650‑M1/97‑45 (MQ=255)
                                                 gccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                      <  1:2050409‑M1/63‑1 (MQ=255)
                                                   catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                  <  1:2213158‑M1/67‑1 (MQ=255)
                                                   catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                  <  1:809334‑M1/67‑1 (MQ=255)
                                                    ggATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                  <  1:5249376‑M1/99‑52 (MQ=255)
                                                    ggATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                  >  2:2793320‑M1/1‑48 (MQ=255)
                                                          ttgttatttcttcattttcataaacgTTGGTTTCGGAGCAGTAGCAAAACTCAATACAGCAACATCTACATTCGCACGCACCGGTTTCATAGCTATACCg                                           <  2:4294521‑M1/74‑1 (MQ=255)
                                                            gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                          >  2:1910652‑M1/25‑99 (MQ=255)
                                                            gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                         <  2:4785483‑M1/76‑1 (MQ=255)
                                                             ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                         >  2:5246316‑M1/24‑99 (MQ=255)
                                                               atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                      <  2:2021469‑M1/79‑1 (MQ=255)
                                                                gCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                                      >  2:5954688‑M1/1‑36 (MQ=255)
                                                                  tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                   <  1:4736149‑M1/82‑1 (MQ=255)
                                                                      cattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                               <  1:3722588‑M1/86‑1 (MQ=255)
                                                                      cattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                 >  2:4028057‑M1/15‑98 (MQ=255)
                                                                       gCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca                              <  2:476864‑M1/100‑72 (MQ=255)
                                                                       attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                              >  2:4311625‑M1/14‑100 (MQ=255)
                                                                       attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                >  1:4038606‑M1/14‑98 (MQ=255)
                                                                        ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                             <  1:1641226‑M1/88‑1 (MQ=255)
                                                                        ctctCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                             >  1:325942‑M1/1‑28 (MQ=255)
                                                                        ctctCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgc                               >  1:1468664‑M1/1‑28 (MQ=255)
                                                                        ctctCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                             >  1:1769635/1‑100 (MQ=255)
                                                                            cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt                         >  1:1733561‑M1/1‑24 (MQ=255)
                                                                             gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg                           <  1:2696769‑M1/97‑75 (MQ=255)
                                                                             ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                        >  2:3195408‑M1/8‑100 (MQ=255)
                                                                              taaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                       >  2:4940534‑M1/7‑100 (MQ=255)
                                                                                aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                      >  2:1778769‑M1/5‑99 (MQ=255)
                                                                                aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                     >  2:5465497‑M1/5‑100 (MQ=255)
                                                                                  cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa                   <  2:5909049‑M1/98‑1 (MQ=255)
                                                                                   gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGATGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                      >  2:3596993‑M1/2‑96 (MQ=255)
                                                                                   gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGcaan                  >  2:3398424‑M1/2‑99 (MQ=255)
                                                                                   cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctt                  >  2:2445639‑M1/1‑17 (MQ=255)
                                                                                    ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                 >  1:2357787‑M1/1‑16 (MQ=255)
                                                                                    ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                 >  2:1235740‑M1/1‑16 (MQ=255)
                                                                                       GTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                     >  2:3485685‑M1/1‑93 (MQ=255)
                                                                                       GTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg               >  2:2654009‑M1/1‑99 (MQ=255)
                                                                                       GTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg               >  2:5534118‑M1/1‑99 (MQ=255)
                                                                                       GTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg               <  1:2294875‑M1/99‑1 (MQ=255)
                                                                                         ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg            >  1:4314869‑M1/1‑11 (MQ=255)
                                                                                          tGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg            <  2:1614914‑M1/99‑90 (MQ=255)
                                                                                           GGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt           >  1:3185164‑M1/1‑99 (MQ=255)
                                                                                           GGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt           <  1:4200875‑M1/99‑1 (MQ=255)
                                                                                            ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctg         <  1:3003766‑M1/100‑93 (MQ=255)
                                                                                            ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct          >  1:2434590‑M1/1‑8 (MQ=255)
                                                                                             gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga        <  1:2885992‑M1/100‑94 (MQ=255)
                                                                                                  ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa    >  2:765885‑M1/1‑2 (MQ=255)
                                                                                                  GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt   <  1:3926237‑M1/100‑1 (MQ=255)
                                                                                                  GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt   <  1:5554248‑M1/100‑1 (MQ=255)
                                                                                                   gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata  >  1:547502‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTG  >  NC_000913_3_bme_pgi/1207706‑1207904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.