New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 1287692197 (0.810)11 (0.080)
+CCGCTTCCCGATAAGGGAGCAGGCCAGTAAAAAGCATTACCCCGT		 6/106 17.4 8.4% intergenic (‑70/+90) tyrT/purU tRNA‑Tyr/formyltetrahydrofolate hydrolase
?NC_000913_3_bme_pgi 4175472 = 252 (1.030)noncoding (1/85 nt) tyrU tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 204 total aligned reads displayed.

TGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAGAATA  >  NC_000913_3_bme_pgi/1287593‑1287791
                                                                                                   |                                                                                                   
tGCTCCCTTTGGCCGCTCAGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGcgcc                                                                                                     >  1:4330962/1‑100 (MQ=255)
  cTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGcgccgc                                                                                                   <  1:572368/100‑1 (MQ=255)
  cTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGcgcc                                                                                                     <  2:2980004/98‑1 (MQ=255)
  cTCCCATTGGCCGTTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGcgccg                                                                                                    <  2:4660459/99‑1 (MQ=255)
    cccTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTg                                                                                                 >  2:5098952/1‑100 (MQ=255)
    cccTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTAATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCt                                                                                                  >  1:2251039/1‑99 (MQ=255)
    cccTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCCCCCTTATCGGGAAGCGGGGCGCATCATACCACATGACGcgccgc                                                                                                   >  2:1576428/1‑98 (MQ=255)
    cccTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGACCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTg                                                                                                 >  1:4654932/1‑100 (MQ=255)
     ccTTTGGCCGCTCGGGAACCCCACCACGAGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCGTCATTTGATATGATGcgcc                                                                                                     <  2:1547611/95‑1 (MQ=38)
      cTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTa                                                                                               <  1:2741393/100‑1 (MQ=255)
      cTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTa                                                                                               <  1:4859515/100‑1 (MQ=255)
         tGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAg                                                                                            >  1:1497354/1‑100 (MQ=255)
           gCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtg                                                                                          <  2:696848/100‑1 (MQ=255)
            ccGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  1:3211398/1‑100 (MQ=255)
            ccGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  1:3900223/1‑100 (MQ=255)
            ccGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  1:578945/1‑100 (MQ=255)
            ccGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  1:730899/1‑100 (MQ=255)
             cGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  1:175217/1‑99 (MQ=255)
             cGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  2:5174417/1‑99 (MQ=255)
             cGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAgtgt                                                                                         >  2:2440685/1‑99 (MQ=255)
              gCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTa                                                                                       <  2:1824789/100‑1 (MQ=255)
               cTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCACATCAAATGACGCGCCGCTGTAAAGTGTTAc                                                                                      >  1:2050190/1‑100 (MQ=255)
                  gggAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGtt                                                                                   <  2:803007/100‑1 (MQ=255)
                    gAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGtt                                                                                   >  1:3111264/1‑98 (MQ=255)
                       ccccACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTgaga                                                                               >  1:2675721/1‑99 (MQ=255)
                       ccccACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTgaga                                                                               >  1:2836965/1‑99 (MQ=255)
                       ccccACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGaa                                                                              <  2:2101643/100‑1 (MQ=255)
                       ccccACCACGGGGTAATGCTTTTTACAGGCCTGCTCCCTCATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGAGTTACGTTgaga                                                                               >  1:5574402/1‑99 (MQ=255)
                        cccACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGaa                                                                              >  1:134132/1‑99 (MQ=255)
                         ccaccaCGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCGTATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGaaa                                                                             >  1:5906335/1‑99 (MQ=255)
                         ccaccaCGGGGTAATGCTTTTTACTGGCCTCCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCCCCGCTGTAAAGTGTTACGTTGAGaaa                                                                             >  2:5811215/1‑99 (MQ=255)
                          caccacGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGaaaaa                                                                           >  2:2705768/1‑100 (MQ=255)
                           accacGGGGTATTGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATAGCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAAt                                                                          <  2:3875578/100‑1 (MQ=255)
                            ccacGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAAt                                                                          >  1:922764/1‑99 (MQ=255)
                            ccacGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATg                                                                         <  1:5440473/100‑1 (MQ=255)
                             cacGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATg                                                                         >  1:5170762/1‑99 (MQ=255)
                                 gggTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAAGGAACTg                                                                    >  1:5126616/1‑100 (MQ=255)
                                  ggTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTgg                                                                   >  1:2936599/1‑100 (MQ=255)
                                    tAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGtt                                                                 <  2:3069231/100‑1 (MQ=255)
                                     aaTGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTg                                                                >  2:4275057/1‑100 (MQ=255)
                                       tGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCg                                                              <  1:2696410/100‑1 (MQ=255)
                                        gCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATAACAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCg                                                              >  1:876345/1‑99 (MQ=255)
                                          tttttACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTaa                                                           >  2:491551/1‑100 (MQ=255)
                                          tttttACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTaa                                                           >  1:1292991/1‑100 (MQ=255)
                                          tttttACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTaa                                                           >  1:4219948/1‑100 (MQ=255)
                                                cTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAAttt                                                        <  2:2348823/97‑1 (MQ=255)
                                                cTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCa                                                     >  2:2228406/1‑100 (MQ=255)
                                                cTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCa                                                     >  1:3802276/1‑100 (MQ=255)
                                                cTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCa                                                     >  1:3964064/1‑100 (MQ=255)
                                                cTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTAAAATAAAAAAAAATGAACTGGTTGCGTAATTTTCa                                                     <  2:354853/100‑1 (MQ=255)
                                                  ggCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATc                                                   >  1:3310039/1‑100 (MQ=255)
                                                  ggCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATc                                                   >  1:3143479/1‑100 (MQ=255)
                                                  ggCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATc                                                   >  2:1757791/1‑100 (MQ=255)
                                                   gCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCAt                                                    <  1:454841/98‑1 (MQ=255)
                                                   gCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATcc                                                  >  2:613351/1‑100 (MQ=255)
                                                   gCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATc                                                   <  1:1049472/99‑1 (MQ=255)
                                                    ccTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCg                                                 >  2:4513550/1‑100 (MQ=255)
                                                     cTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGt                                                <  1:374963/100‑1 (MQ=255)
                                                        cTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGCTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAAc                                             >  2:5296125/1‑100 (MQ=255)
                                                                tCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTaaa                                     <  1:2505639/100‑1 (MQ=255)
                                                                tCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTaa                                      <  2:1713204/99‑1 (MQ=255)
                                                                  gggAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAgg                                   >  1:1397551/1‑100 (MQ=255)
                                                                   ggAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGt                                  <  1:1149218/100‑1 (MQ=255)
                                                                    gAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGt                                  >  2:633623/1‑99 (MQ=255)
                                                                    gAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTa                                 <  1:3037973/100‑1 (MQ=255)
                                                                      aGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAAc                               <  1:159266/100‑1 (MQ=255)
                                                                           ggCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGtt                          <  2:4035301/100‑1 (MQ=255)
                                                                             cgcATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAt                        <  2:2193527/100‑1 (MQ=255)
                                                                               catcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTGAAGGTAACCAGTTAttt                      >  2:1200921/1‑100 (MQ=255)
                                                                               catcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAttt                      >  2:2577651/1‑100 (MQ=255)
                                                                               catcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAttt                      <  1:5947910/100‑1 (MQ=255)
                                                                                atcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACGAGTTAtttt                     >  2:5556539/1‑100 (MQ=255)
                                                                                atcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAtttt                     >  2:5556825/1‑100 (MQ=255)
                                                                                atcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAtttt                     >  2:1400117/1‑100 (MQ=255)
                                                                                atcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAtttt                     >  1:4063789/1‑100 (MQ=255)
                                                                                 tcatATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTAttttt                    <  2:1797174/100‑1 (MQ=255)
                                                                                   atatCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGc                  >  2:3227264/1‑100 (MQ=255)
                                                                                    tatCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCt                 >  2:2626866/1‑100 (MQ=255)
                                                                                    tatCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCt                 <  1:2074268/100‑1 (MQ=255)
                                                                                      tCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTgg               >  1:2334196/1‑100 (MQ=255)
                                                                                       cAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCt                 >  2:2148082/1‑97 (MQ=255)
                                                                                       aaaaTGACGCGCCGCTGTAACGTGTTACGTTGAGAAAAATGAACTGGATGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTACTTTTGCt                 >  1:3082931/2‑97 (MQ=255)
                                                                                        aaaTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTgg               <  2:1956412/98‑1 (MQ=255)
                                                                                        aaaTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGc              >  1:5758758/1‑99 (MQ=255)
                                                                                        aaaTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGc              <  1:5225125/99‑1 (MQ=255)
                                                                                        aaaTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGc              <  1:2790353/99‑1 (MQ=255)
                                                                                         aaTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGc              >  1:4707397/1‑98 (MQ=255)
                                                                                          aTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGAt           <  2:108125/100‑1 (MQ=255)
                                                                                          aTGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGAt           <  2:3357388/100‑1 (MQ=255)
                                                                                           tGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGAt           >  2:2461179/1‑99 (MQ=255)
                                                                                            gACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCAGGCGAtt          >  2:5720195/1‑99 (MQ=255)
                                                                                             aCGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTa         <  2:4767600/99‑1 (MQ=255)
                                                                                              cgcgCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTa         >  2:5929921/1‑98 (MQ=255)
                                                                                               gcgcCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTaaa       <  1:4501076/99‑1 (MQ=255)
                                                                                               gcgcCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTaaa       <  1:414674/99‑1 (MQ=255)
                                                                                               gcgcCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAg      <  1:1130443/100‑1 (MQ=255)
                                                                                               gcgcCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAg      <  1:4763197/100‑1 (MQ=255)
                                                                                               gcgcCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAg      <  2:4188146/100‑1 (MQ=255)
                                                                                                cgccgcTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAg      <  2:1294494/99‑1 (MQ=255)
                                                                                                  ccgcTGTAAAGTGTTACGTTGAGAAAAATGGACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAGaat   <  1:5633693/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGATTAAAGGTAACCAGTTATTTTTGCTGGCGATTAAAGAATA  >  NC_000913_3_bme_pgi/1287593‑1287791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.