Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913_3_bme_pgi 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_bme_pgi 257908–258676 258683 8–776 195 [0] [0] 195 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 2579070 (0.000)182 (0.930) 100/180 0.1 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913_3_bme_pgi 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

Only 100 of 195 total aligned reads displayed.

CATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913_3_bme_pgi/257809‑258002
                                                                                                  |                                                                                               
 aTCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAag                                                                                               <  2:2078440‑M1/100‑3 (MQ=255)
   cacaACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCCCTAGGCCCGTATATTCGTGAAGGTAagtg                                                                                             >  1:1665886‑M1/1‑96 (MQ=255)
   cacaACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtg                                                                                             >  2:3271227‑M1/1‑96 (MQ=255)
    acaacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgc                                                                                            <  1:4039777‑M1/100‑6 (MQ=255)
    acaacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtg                                                                                             >  1:4825373‑M1/1‑95 (MQ=255)
     caacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgc                                                                                            >  1:5219603‑M1/1‑94 (MQ=255)
     caacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGAAGATTAAAAAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                           <  2:3662191‑M1/100‑7 (MQ=255)
      aacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                           >  2:944844‑M1/1‑93 (MQ=255)
          ggAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga                                                                                       >  1:2146925‑M1/1‑89 (MQ=255)
          ggAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga                                                                                       >  1:5322806‑M1/1‑89 (MQ=255)
           gagaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGCTTGATCAAAAAATTTACCGCACTAGACCCGTATATTCGTGAAGGTAagcgcaaagat                                                                                      >  1:4866178‑M1/1‑88 (MQ=255)
            agaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagat                                                                                      >  1:1794206‑M1/1‑87 (MQ=255)
              aTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                  <  2:275504‑M1/100‑16 (MQ=255)
              aTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                  <  1:4535708‑M1/100‑16 (MQ=255)
               tAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                  >  1:99124‑M1/1‑84 (MQ=255)
                 gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                               <  2:3231501‑M1/100‑19 (MQ=255)
                 gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                               >  1:4495388‑M1/1‑82 (MQ=255)
                 gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                               >  1:1045810‑M1/1‑82 (MQ=255)
                    aTGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattc                                                                             <  2:3184744‑M1/99‑21 (MQ=255)
                        cGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttttt                                                                        >  1:4653176‑M1/1‑75 (MQ=255)
                         gTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttc                                                                       <  2:4758840‑M1/100‑27 (MQ=255)
                         gTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttc                                                                       >  1:1199412‑M1/1‑74 (MQ=255)
                          ttACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcg                                                                      <  2:632458‑M1/100‑28 (MQ=255)
                          ttACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttc                                                                       <  2:3794782‑M1/99‑27 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                   >  1:342293‑M1/1‑70 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                   <  2:2656449‑M1/100‑31 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                   >  1:4214420‑M1/1‑70 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgat                                                                    <  1:791229‑M1/99‑30 (MQ=255)
                              cGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattg                                                                  <  1:710223‑M1/100‑32 (MQ=255)
                                aGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtc                                                                >  1:3510747‑M1/1‑67 (MQ=255)
                                aGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgt                                                                 >  2:3994475‑M1/1‑67 (MQ=255)
                                   ggACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgg                                                             >  2:2307715‑M1/1‑64 (MQ=255)
                                    gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagatattcgattctttttcgattgtctggc                                                            <  2:5006390‑M1/100‑38 (MQ=255)
                                    gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                            <  1:1121457‑M1/100‑38 (MQ=255)
                                    gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                            <  2:1300592‑M1/100‑38 (MQ=255)
                                     acacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggct                                                           >  1:2521201‑M1/1‑62 (MQ=255)
                                     acacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggct                                                           >  2:1467598‑M1/1‑62 (MQ=255)
                                        cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCTTGAAGGTAagtgcaaatataatcgattctttttagattgtctggctcta                                                        <  2:4065144‑M1/100‑42 (MQ=255)
                                        cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                        >  1:3944248‑M1/1‑59 (MQ=255)
                                         ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                       <  1:3598029‑M1/100‑43 (MQ=255)
                                         ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                       >  1:756484‑M1/1‑58 (MQ=255)
                                         ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                       >  1:230449‑M1/1‑58 (MQ=255)
                                         ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTACATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                       >  2:4429979‑M1/1‑58 (MQ=255)
                                          cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                      <  1:5310093‑M1/100‑44 (MQ=255)
                                               agCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                  >  2:1756245‑M1/1‑52 (MQ=255)
                                               agCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                  >  2:3488993‑M1/1‑52 (MQ=255)
                                                 cAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaac                                               <  2:4886638‑M1/100‑51 (MQ=255)
                                                 cAGACTGGTCAAAAAATTTACCGCACGGGGGCCGTAGATGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                      <  2:4325831‑M1/93‑44 (MQ=255)
                                                  aGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacg                                              <  2:4155934‑M1/100‑52 (MQ=255)
                                                   gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgt                                             <  1:3288947‑M1/100‑53 (MQ=255)
                                                   gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgt                                             >  1:849983‑M1/1‑48 (MQ=255)
                                                     ttGATAAAAAAAATCACCGCACTAGGCCCGTTTATTCGTGAAGTTAagtgcaaagctaatcgattctttttcgattgtctggctgtatgcgtcaacgtga                                           <  2:4562677‑M1/100‑55 (MQ=255)
                                                        aTCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                        >  2:1203455‑M1/1‑43 (MQ=255)
                                                        aTCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                        <  2:4363966‑M1/100‑58 (MQ=255)
                                                         tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacc                                       <  2:5022100‑M1/100‑59 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaa                                         >  2:4683009‑M1/1‑41 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgttttttttgctgtatgcgtcaacgtgaaaccgg                                     >  2:3274208‑M1/1‑40 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                     <  2:4284889‑M1/100‑61 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                     >  2:3926356‑M1/1‑40 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                      <  1:2935035‑M1/99‑60 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGCAagtgcaaagataatcgattctttttcgcttgtctggctgtatgcgtcaacgtgaaaccg                                      >  2:5064302‑M1/1‑40 (MQ=255)
                                                             aaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggca                                   <  2:3142117‑M1/100‑63 (MQ=255)
                                                             aaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggca                                   >  1:899088‑M1/1‑38 (MQ=255)
                                                                aTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccg                                >  2:2519849‑M1/1‑35 (MQ=255)
                                                                   tACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccgga                              <  2:2330946‑M1/99‑68 (MQ=255)
                                                                    aCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaag                            >  1:1396621‑M1/1‑31 (MQ=255)
                                                                     ccGCCCTAGGCCCGTATATTCGTGAAGGTAagtgcatagataatcgatactttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaag                            <  1:4439087‑M1/99‑70 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                           >  2:263917‑M1/1‑30 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                           <  1:3844187‑M1/100‑71 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                           >  1:1494665‑M1/1‑30 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                           >  1:3637720‑M1/1‑30 (MQ=255)
                                                                      cGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttctcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtg                          >  2:4995262‑M1/1‑29 (MQ=255)
                                                                       gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgc                         >  2:3456839‑M1/1‑28 (MQ=255)
                                                                       gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgc                         >  2:578906‑M1/1‑28 (MQ=255)
                                                                         aCTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgt                       >  2:1181772‑M1/1‑26 (MQ=255)
                                                                          cTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                      <  1:701073‑M1/100‑76 (MQ=255)
                                                                             ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaat                   >  1:2055806‑M1/1‑22 (MQ=255)
                                                                             ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                      <  2:3547272‑M1/97‑76 (MQ=255)
                                                                              gCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaatt                  <  1:4324272‑M1/100‑80 (MQ=255)
                                                                              gCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttgtcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaat                   <  2:321339‑M1/99‑79 (MQ=255)
                                                                                  gTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg              <  2:5185972‑M1/100‑84 (MQ=255)
                                                                                  gTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg              <  1:2947223‑M1/100‑84 (MQ=255)
                                                                                   tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggg             <  1:2412918‑M1/100‑85 (MQ=255)
                                                                                     tatTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggc           >  1:388616‑M1/1‑14 (MQ=255)
                                                                                     tatTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggc           <  2:2496258‑M1/100‑87 (MQ=255)
                                                                                     tatTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggc           >  1:4731286‑M1/1‑14 (MQ=255)
                                                                                     tatTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg            >  1:3052342‑M1/1‑14 (MQ=255)
                                                                                      atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggct          >  1:3323613‑M1/1‑13 (MQ=255)
                                                                                       ttCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctg         <  2:741401‑M1/100‑89 (MQ=255)
                                                                                         cGTGAAGGTGagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                      >  1:3139366‑M1/1‑10 (MQ=255)
                                                                                         cGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt       >  2:4121217‑M1/1‑10 (MQ=255)
                                                                                         cGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt       >  1:1485281‑M1/1‑10 (MQ=255)
                                                                                          gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtg      <  2:1332961‑M1/100‑92 (MQ=255)
                                                                                          gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt       <  2:374257‑M1/99‑91 (MQ=255)
                                                                                           tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgg     <  2:4948514‑M1/100‑93 (MQ=255)
                                                                                           tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtg      >  2:1637420‑M1/1‑8 (MQ=255)
                                                                                              aGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg  <  1:5117388‑M1/100‑96 (MQ=255)
                                                                                              aGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg  <  1:2491802‑M1/100‑96 (MQ=255)
                                                                                              aGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg  >  1:1031587‑M1/1‑5 (MQ=255)
                                                                                                 tAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgagtgaattctggggctggtggatg  >  1:2275344‑M1/1‑2 (MQ=255)
                                                                                                  |                                                                                               
CATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913_3_bme_pgi/257809‑258002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.