Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_bme_pgi1,778,3750AG21.0% 420.5 / 117.2 214intergenic (+28/+15)ydiO/ydiPputative acyl‑CoA dehydrogenase/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (102/67);  new base G (29/16);  total (131/83)
Fisher's exact test for biased strand distribution p-value = 7.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.12e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 218 total aligned reads displayed.

GGCGGCGGTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATC  >  NC_000913_3_bme_pgi/1778276‑1778473
                                                                                                   |                                                                                                  
      ggTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTgcgc                                                                                              <  1:2200815/100‑1 (MQ=255)
       gTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTgcg                                                                                               >  2:688423/1‑98 (MQ=255)
       gTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGcgcc                                                                                             >  1:499806/1‑100 (MQ=255)
       atACAGAAAAAATTATGATGTCCGTAGCAGGCCGGCAAAGCCTGAAAGACTTTCAAAGCAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCGgcgcn                                                                                             <  2:1111510/99‑2 (MQ=255)
        tACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCTGcgccg                                                                                            <  2:4787133/100‑1 (MQ=38)
          cAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGcgccgc                                                                                           <  1:4505249/99‑1 (MQ=255)
           aGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCTGCgccgcct                                                                                         <  1:193058/100‑2 (MQ=37)
           aGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCTGCgccgcct                                                                                         <  1:2379064/100‑2 (MQ=38)
           aGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCTGCgccgcc                                                                                          <  2:3345590/99‑1 (MQ=37)
           aGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGcgccgc                                                                                           >  2:3550727/1‑98 (MQ=255)
            gACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGTTTGTTAAGAAGCTGCgccgcctg                                                                                        <  1:1278885/100‑3 (MQ=37)
            gACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGcgccgc                                                                                           >  2:574680/1‑97 (MQ=255)
            gACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGcgccgc                                                                                           >  1:1791962/1‑97 (MQ=255)
               gAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGAtt                                                                                     >  1:1146164/1‑100 (MQ=255)
               gAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGAtt                                                                                     <  2:2115004/100‑1 (MQ=255)
               gAAATTATGATTTACGTAGCAGGTCGGCAGAGCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGAtt                                                                                     <  2:2615416/100‑1 (MQ=255)
                  aTTATGATTCACGTAGCAGGTCGGAAAATCCTGAAAGACTATTAGAACAAATACTCTGCAGGCGGAGCAGCTTCTTAACAAACTGCGCCGCCAGATTTAt                                                                                  >  2:2424332/1‑100 (MQ=255)
                      tGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCca                                                                               <  2:4610980/99‑1 (MQ=255)
                       gATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaa                                                                              >  1:790060/1‑99 (MQ=255)
                       gATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaa                                                                              >  2:82853/1‑99 (MQ=255)
                       gATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaa                                                                              >  1:2957403/1‑99 (MQ=255)
                       gATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaa                                                                              >  2:4183384/1‑99 (MQ=255)
                        aTTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaac                                                                             >  1:4132298/1‑99 (MQ=255)
                         tttACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaac                                                                             >  1:4380971/1‑98 (MQ=255)
                          ttACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCcaac                                                                             >  2:2798568/1‑97 (MQ=255)
                             cGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGAc                                                                        <  2:3967844/99‑1 (MQ=255)
                               tAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTa                                                                     >  2:5051541/1‑100 (MQ=255)
                                aGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTAc                                                                    >  1:2712422/1‑100 (MQ=255)
                                  cAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTAcc                                                                   <  2:1438393/99‑1 (MQ=255)
                                  cAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCg                                                                  >  1:3796115/1‑100 (MQ=255)
                                      tCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGttn                                                              <  2:1161268/100‑2 (MQ=255)
                                        ggCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAg                                                            >  1:1372741/1‑100 (MQ=255)
                                        ggCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAg                                                            >  1:4910420/1‑100 (MQ=255)
                                         gCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAgg                                                           <  1:571656/100‑1 (MQ=255)
                                               ccTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAAtt                                                      >  2:810692/1‑99 (MQ=255)
                                               ccTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGCTGAGGAAAtt                                                      >  2:2466877/1‑99 (MQ=255)
                                                cTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAAtt                                                      >  1:4759004/1‑98 (MQ=255)
                                                  gAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAAtt                                                      >  2:2160675/1‑96 (MQ=255)
                                                      gACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAgg                                              <  1:2824845/100‑1 (MQ=255)
                                                      gACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAg                                               >  2:2362272/1‑99 (MQ=255)
                                                         tATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGAtt                                           >  2:4061882/1‑100 (MQ=255)
                                                          aTCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGAttt                                          >  2:924437/1‑100 (MQ=255)
                                                          aTCAAAACAAATAATCTGCACGCGGCGCAGCTTCTTAACACACTGCGCAGCCAGATTTACCCAACAAGAc                                                                        >  2:3359249/1‑70 (MQ=255)
                                                           tCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGAtt                                           <  2:1704696/98‑1 (MQ=255)
                                                           tCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTc                                         >  1:3108992/1‑100 (MQ=255)
                                                           tCAGAAAAAATAATCTGCAGACGGCGCAGCCTCTTAACACACTGCGCCGCCAGATTTATcc                                                                                <  2:1548873/61‑1 (MQ=255)
                                                             aGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCtt                                       >  2:905990/1‑100 (MQ=255)
                                                             aGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCtt                                       <  1:2307809/100‑1 (MQ=255)
                                                             aGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCtt                                       <  2:1613151/100‑1 (MQ=255)
                                                             aGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCtt                                       >  1:3414446/1‑100 (MQ=255)
                                                             aGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCt                                        <  2:4366886/99‑1 (MQ=255)
                                                                 cAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTCCCGGTTGAGGCAATTCAGCTAGGATTTATTGTTc                                   >  2:5038705/1‑100 (MQ=255)
                                                                   aataatCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCg                                 <  2:3737913/100‑1 (MQ=255)
                                                                   aataatCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCg                                 <  1:3509664/100‑1 (MQ=255)
                                                                    ntaatCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCg                                 >  1:54234/2‑99 (MQ=255)
                                                                    ataatCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCg                                 >  1:4987641/1‑99 (MQ=255)
                                                                       atCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCaa                              >  2:1286268/1‑99 (MQ=255)
                                                                          tGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGtt                                                               >  2:1790597/1‑63 (MQ=255)
                                                                            ctggcggcGCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGt                        >  1:3605377/3‑100 (MQ=37)
                                                                            cAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGt                        >  1:2584908/1‑100 (MQ=255)
                                                                             tggcggcGCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtt                       >  1:5014522/2‑100 (MQ=37)
                                                                             tggcggcGCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtt                       >  1:3773238/2‑100 (MQ=37)
                                                                             aGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtt                       <  2:4668425/100‑1 (MQ=255)
                                                                                cggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCaaaa                            >  2:3976753/1‑92 (MQ=38)
                                                                                cggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtttt                     >  1:1104370/1‑99 (MQ=38)
                                                                                cggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtttt                     >  2:1353179/1‑99 (MQ=38)
                                                                                cggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtttt                     >  1:2105884/1‑99 (MQ=38)
                                                                                cggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGcttt                     >  2:1973451/1‑99 (MQ=38)
                                                                                cggcgCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    <  2:4867509/100‑1 (MQ=255)
                                                                                cggcgCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGtttt                     >  1:2798127/1‑99 (MQ=255)
                                                                                 ggcgCAGTTTGTTAAGAAGCTGCGCCGCCGGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  1:3245370/1‑99 (MQ=37)
                                                                                 ggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  1:4669530/1‑99 (MQ=38)
                                                                                 ggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  1:3186547/1‑99 (MQ=38)
                                                                                 ggcgCAGTTTGTTAAGAAGCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  2:3865599/1‑99 (MQ=38)
                                                                                 ggcgCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  1:317096/1‑99 (MQ=255)
                                                                                   cgcAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGttttt                    >  2:1806430/1‑97 (MQ=255)
                                                                                   cgcAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTaaa                 >  2:4251142/1‑100 (MQ=255)
                                                                                     cAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTaaa                 <  1:2778775/98‑1 (MQ=255)
                                                                                     cAGCTTCTTAACAAACTGCGCCGCAAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTa                   <  2:2956851/96‑1 (MQ=255)
                                                                                     cAGCTTCTTAACAAAATGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGAAAATTCAGATAGGATTTCTTGTTCCGCAAGACAGttt                      >  2:5191509/1‑93 (MQ=255)
                                                                                        cttcttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTg              <  2:3904888/98‑1 (MQ=255)
                                                                                        cttcttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGt             >  2:2117762/1‑99 (MQ=255)
                                                                                        cttcttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTc            >  2:1755659/1‑100 (MQ=255)
                                                                                           cttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTc            >  2:2253005/1‑97 (MQ=255)
                                                                                           cttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTAc         >  1:159268/1‑100 (MQ=255)
                                                                                           cttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTAc         >  1:4808326/1‑100 (MQ=255)
                                                                                            ttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCt           <  1:2264057/97‑1 (MQ=255)
                                                                                            ttAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACg        >  1:3794371/1‑100 (MQ=255)
                                                                                             tAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  1:905917/1‑100 (MQ=255)
                                                                                             tAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  2:3640026/1‑100 (MQ=255)
                                                                                             tAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  1:1306331/1‑100 (MQ=255)
                                                                                              aaCAAACTGCGTCGCCAGATTTATCCAACAAGACTGACCGGTTGAGGCAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACg        <  1:4430629/98‑1 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  1:3314822/1‑99 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  1:63154/1‑99 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       <  2:4938245/99‑1 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       <  2:278730/99‑1 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACgg       >  1:2055441/1‑99 (MQ=255)
                                                                                              aaCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACg        <  1:3872735/98‑1 (MQ=255)
                                                                                               aCAAACTGCGCCNCCAGATNTATCCAACAAGACTTACCGGTTGAGGAAATTCANATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATNGTCTACGGt      <  1:1735007/99‑1 (MQ=255)
                                                                                                  aaCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATc  <  1:2873127/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GGCGGCGGTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAATCTGCAGGCGGCGCAGCTTCTTAACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATC  >  NC_000913_3_bme_pgi/1778276‑1778473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑