New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_bme_pgi | = 373065 | 32 (1.060) | 4 (0.150) | 4/252 | 3.5 | 12.1% | coding (145/951 nt) | mhpF | acetaldehyde‑CoA dehydrogenase II, NAD‑binding |
? | NC_000913_3_bme_pgi | = 373047 | 30 (1.130) | coding (127/951 nt) | mhpF | acetaldehyde‑CoA dehydrogenase II, NAD‑binding | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/373029‑373065 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctggcgcgcgccagacCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAATGTTGCCAGAACCGATAATGGCGACTTTACGCTTACTCATGACAGACTTCCTTTTG < NC_000913_3_bme_pgi/373047‑372905 ATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGACCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGT < 1:387166/91‑1 ATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGACCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGT > 2:387166/1‑91 GACGGTCTGGCGCGCGCCAGACCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAAT > 1:198184/1‑110 GACGGTCTGGCGCGCGCCAGACCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAAT < 2:198184/110‑1 ccGGCGCGCGCCAGACCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAATGTTGCCAGAACCGATAATGGCGACTTTACGCTTACTCATGACAGA < 1:407847/147‑1 CCAGACCGGCGGACTGATGAGCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAATGTTGCCAGAACCGATAATGGCGACTTTACGCTTACTCATGACAGACTTCCTTTTG < 1:40436/149‑1 ATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/373029‑373065 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctggcgcgcgccagacCGTCGGACTGAGGATCAATGCCAACCATCACCGCCATCTCCAGATGCTGACCGTGACGCAAAATTTTAATCATCAGATCGGTACCAATGTTGCCAGAACCGATAATGGCGACTTTACGCTTACTCATGACAGACTTCCTTTTG < NC_000913_3_bme_pgi/373047‑372905 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |