New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 3092488	30 (0.640)	4 (0.090)	4/262	NT	11.6%	coding (611/951 nt)	gshB	glutathione synthetase
	?	NC_000913_3_bme_pgi	= 3092493	32 (0.710)					coding (616/951 nt)	gshB	glutathione synthetase

ACATCATTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAA  >  NC_000913_3_bme_pgi/3092344‑3092636                                                                                                                                                 |                                                                                                                                                     aCATCATTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTaaa                                                                                                                                                  <  1:753997/149‑1 (MQ=255)     catTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGatg                                                                                                                                              <  2:396066‑M2/149‑4 (MQ=255)         cTTAAGCCGCTTGACGTTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGa                                                                                                                                          <  2:561394/149‑1 (MQ=255)             aGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACaaa                                                                                                                                      <  2:628952/149‑1 (MQ=255)                      aCGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCtg                                                                                                                             <  1:276834/149‑1 (MQ=255)                         gTATGGGCGGCGCGGCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCtggtg                                                                                                                          <  1:617674/149‑1 (MQ=255)                              ggcggcGCGTCGATTTCCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGa                                                                                                                     <  1:866629/149‑1 (MQ=255)                                      gTCGATTTTCCGCGTGAAAGAAGGCGATACAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTAATGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTACTGTTGGTGGCTgctgtcc                                                                                                             >  2:707750/1‑143 (MQ=255)                                       tCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCCTGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGcc                                                                                                            >  2:367838/1‑149 (MQ=255)                                       tCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATctttaatggctggca                                                                                                                                       <  1:798075‑M1/122‑16 (MQ=255)                                       tCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATctttaatggctggca                                                                                                                                       >  2:798075‑M1/1‑107 (MQ=255)                                                cgggTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTa                                                                                                   <  2:394179/146‑1 (MQ=255)                                                cgcgTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTa                                                                                                   <  2:482229/149‑1 (MQ=255)                                                          aagGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTCCTGCCTGgcg                                                                                         >  2:279199/1‑149 (MQ=255)                                                                 tacAAACCTCGGCGTGATTGCCGAAACCCTCACTGAGCATGGCACTCGCTACTACATGACGCAAAATTACCTGCCAGCCATTAAACAAGGCGACAAACGCGTACTAGCGGACGATGCCAAACCGGTACCGTACTCCCAcgcgcgaaatc                                                                                  >  2:11036/3‑144 (MQ=255)                                                                 tCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGACGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTc                                                                                  >  2:298437/1‑149 (MQ=255)                                                                    aaaCCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACACGTGCTGGTGGTGGATGGCAAGCGGGTCACGTACTGCCTGCGCCGTATTCCGc                                                                               >  2:84386/1‑149 (MQ=255)                                                                         gcGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAgggg                                                                          <  2:657058/148‑1 (MQ=255)                                                                                 aTTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGTATGTCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAAc                                                                  >  1:845589/1‑149 (MQ=255)                                                                                  ttGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATctttaatggctggcaggtaa                                                                                                                                  >  1:174688‑M1/1‑64 (MQ=255)                                                                                  ttGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATctttaatggctggcaggtaa                                                                                                                                  <  2:174688‑M1/84‑21 (MQ=255)                                                                                             tggttggaGGATGGCACTCGCTACTGCATGGCGTAAAATTCCCTGCCTGCCATTAAAGGTGGCGACGATTGTGTGTTGGTGGTGGATGGCGAGGCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCt                                                      <  1:159561/143‑1 (MQ=255)                                                                                             ctgactgaGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGTGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATCCGGCAGGGGGGCGAAACACGTGGCAATCt                                                      >  1:407654/1‑149 (MQ=255)                                                                                                actgaGCATGGCACTCGTGACTGCATGGCGCAAAATTACCTGCCCGCCATTAAAGTTGGCGACAAACGCGTGCTGGTGGTGGATGGCGGGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGc                                                   <  2:174539/149‑1 (MQ=255)                                                                                                      cATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGACGAGTATTCCGCAGGGGGGCAAACCCCCTAGCAAACTGGCTGCCgg                                             >  1:360960/1‑149 (MQ=255)                                                                                                        tGGCACTCGCTACTGCATGGCCCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCTAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCggtg                                           <  1:680472/149‑1 (MQ=255)                                                                                                              tCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTcgcg                                     >  1:554324/1‑149 (MQ=255)                                                                                                              tCGCTACTGCATGGCGCAAAATCACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGAGAAACACGTGGCAATCTGGCTGCCGGTGGTcgcg                                     >  1:67077/1‑149 (MQ=255)                                                                                                                    cTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGc                                                                       <  2:877938/109‑1 (MQ=255)                                                                                                                    cTGCATGGCGAAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGc                                                                       >  1:877938/1‑109 (MQ=255)                                                                                                                     tGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTTCCGTACTGCCTGGCGCATAGTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGaaac                              >  2:678785/1‑147 (MQ=255)                                                                                                                        aTGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCCATCTGGCTGCCGGTGGTCGCGGTGACCCtag                           >  2:536249/1‑147 (MQ=255)                                                                                                                                aaaTTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGa                   >  2:755856/1‑149 (MQ=255)                                                                                                                                   ttACCTGCCAGCCATTAAAGatggctggcaggtaattttgcgccatgcagtagcgagtgccatgctcagtcagggtttcggcaa                                                                                 <  2:174688‑M2/84‑65 (MQ=255)                                                                                                                                   ttACCTGCCAGCCATTAAAGatggctggcaggtaattttgcgccatgcagtagcgagtgccatgctcagtcagggtttcggcaa                                                                                 >  1:174688‑M2/1‑20 (MQ=255)                                                                                                                                       cTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAg            <  1:755856/149‑1 (MQ=255)                                                                                                                                       cTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGAAGGGGGGCGGAACCCGTTGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCACTGACgggagg            >  2:292308/1‑145 (MQ=255)                                                                                                                                        tGCCAGCCATTAAAGatggctggcaggtaattttgcgccatgcagtagcgagtgccatgctcagtcagggtttcggcaatcacgccgaggtttggatcgccttctttcacgcggaaaatcga                                      <  1:798075‑M2/122‑108 (MQ=255)                                                                                                                                        tGCCAGCCATTAAAGatggctggcaggtaattttgcgccatgcagtagcgagtgccatgctcagtcagggtttcggcaatcacgccgaggtttggatcgccttctttcacgcggaaaatcga                                      >  2:798075‑M2/1‑15 (MQ=255)                                                                                                                                           tatccaTTAAAGATGGTGACAATTGCGTGTTGGTTGTGGATGGCGAGTCGGTACTGTTCTGCCTGGCGCTTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGAc        <  1:194088/146‑1 (MQ=255)                                                                                                                                           caggcaTTGAAGGTGGCGACACACGGGTGCTGGGGGGGGATGGCGATCCGGTCACGTACTGCCTGTCGCATATTCCGCGGGGGGGCGGATGTCTTGTCGCTCGTGCTGTCGTTGGTCGCGGTGATCCTCGTCCGCTGACGGAAAGTGat        <  2:642151/149‑2 (MQ=255)                                                                                                                                             gccaTTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTg      <  1:455582/149‑1 (MQ=255)                                                                                                                                               caTctttaatggctggcaggtaattttgcgccatgcagtagcgagtgccatgctcagtcagggtttcggcaatcacgccgaggtttggatcgccttctttcacgcggaaaatcgacgcgccgcccataccgtccagcggcttaagaatg    <  2:396066‑M1/149‑147 (MQ=255)                                                                                                                                                 ttAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCGGGCGCGTATTACGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACAGCGTCCGCTGACGGCAAGTGACTGGaaa  >  2:720189/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                     ACATCATTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAA  >  NC_000913_3_bme_pgi/3092344‑3092636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.