New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 42293861230 (14.450)72 (0.890) 39/260 1.8 5.8% noncoding (11/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_bme_pgi = 4229405 NA (NA)noncoding (30/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Frequency below/above cutoff threshold.

Only 100 of 242 total aligned reads displayed.

GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/4229230‑4229386
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAAT  <  NC_000913_3_bme_pgi/4229405‑4229256
                                                                                                                                                                                                                                                                                                                   
nCAGAGCATTGAAACCAGTTCGCTACAGTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGCCGGAACGAGAATTAATATTGTGAATCCTGTAGG                                                                                                                                                              >  2:171481/2‑151
GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGG                                                                                                                                                              >  1:603553/1‑151
GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGG                                                                                                                                                              <  2:213692/151‑1
 CAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGG                                                                                                                                                              >  3:480701/1‑150
  AGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCC                                                                                                                                                            >  1:563331/1‑151
  AGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCAGGATGACGATGAAAGACGGGACGAGTAGTGATATTGTGAAGCCTGTAGGCC                                                                                                                                                            >  1:514947/1‑151
   GAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           >  2:616926/1‑151
   GAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           <  2:850824/151‑1
   GAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCC                                                                                                                                                            <  3:389047/150‑1
   GAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCC                                                                                                                                                            <  3:207852/150‑1
    cttATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:627251/148‑1
    AGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:244575/151‑1
    AGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:353044/151‑1
    AGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           <  3:152665/150‑1
     GCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGA                                                                                                                                                         >  1:100531/1‑151
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        <  1:835042/151‑1
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        <  2:76696/151‑1
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        <  1:203786/151‑1
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        >  1:173504/1‑151
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        >  1:747616/1‑151
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGA                                                                                                                                                         <  4:237554/150‑1
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:51050/149‑1
      CATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          >  2:51050/1‑149
       ATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        <  3:437076/150‑1
       ATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        >  4:538178/1‑150
                        acgtgTAGGCTTACTGGGAGATATGCAGCGCCTGAGCTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCT                                                                                                                                      <  2:494575/146‑1
                         CATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           >  1:717129/1‑129
                          ATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTT                                                                                                                                     >  3:235689/1‑150
                          ATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTT                                                                                                                                     <  4:310710/150‑1
                          ATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCC                                                                                                                                                            <  2:330374/127‑1
                            TTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATC                                                                                                                                  <  2:256476/151‑1
                            TTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTTAT                                                                                                                                   <  4:550668/150‑1
                              AGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTTATCAG                                                                                                                                <  1:921802/151‑1
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                                                                               <  2:365622/151‑1
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                                                                               >  2:730611/1‑151
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAG                                                                                                                                <  4:230525/150‑1
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTTATCAGG                                                                                                                               <  2:553065/151‑1
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:674301/124‑1
                               GGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          >  2:674301/1‑124
                                GCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                                                                              <  1:735737/151‑1
                                GCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                                                                               <  4:47568/150‑1
                                 CTTGCTGGGAGATATGCAGGGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACGGTGTGCTGGAACAGCCGGATGAAGATGTGGGACGGGGCGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTTATCAGGCC                                                                                                                             <  2:858853/151‑1
                                 CTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                                                                              <  4:112691/150‑1
                                 CTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  2:722058/122‑1
                                  TTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCT                                                                                                                            <  1:410155/151‑1
                                  TTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCC                                                                                                                             <  3:162562/150‑1
                                   TACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTA                                                                                                                           <  1:313388/151‑1
                                    ACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCT                                                                                                                                      <  2:940115/139‑1
                                    ACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCT                                                                                                                                      >  1:940115/1‑139
                                    ACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           >  2:145060/1‑118
                                      gGGGAGATATGCAGGGCCTGAACTAGCTGTTTTGGTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTGATATTGTGAATCCTGTGGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACA                                                                                                                         <  4:206935/149‑1
                                       GGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAG                                                                                                                        <  3:362902/150‑1
                                        GGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                                                                               >  3:64424/1‑142
                                        GGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                                                                               <  4:64424/142‑1
                                             taaggAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACTGTGTGCTGGACCAGCCGGATGAAGACGAAGGACGTGACGAATATAAATATTGTTAATACGGTAGGCCTGATGCCACGCTAGACGCGGCTTATCAGGCCTACAGGATTCA                                                                                                                  <  4:187232/145‑1
                                             TATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCAC                                                                                                                 <  2:398478/151‑1
                                              ATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGA                                                                                                                                                         <  3:575498/110‑1
                                                GCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCC                                                                                                                             <  1:588200/136‑1
                                                 CAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCC                                                                                                                             <  2:81055/135‑1
                                                 CAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCC                                                                                                                             >  1:81055/1‑135
                                                  AGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           >  4:489895/1‑104
                                                  AGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           <  3:489895/104‑1
                                                       CTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT                                                                                                                                                        <  3:311524/102‑1
                                                         GAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACT                                                                                                     <  1:545600/151‑1
                                                             TCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          <  1:231151/94‑1
                                                             TCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG                                                                                                                                                          >  2:231151/1‑94
                                                             TCGCTGCTTTGTTCGGTGGCATACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGCGTATTAATATTGTGACTCCTGTAGGCCTCATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTC                                                                                                 <  2:571917/151‑1
                                                                     TTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTT                                                                                         <  1:730611/151‑1
                                                                        TTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTAT                                                                                                                                   >  4:452212/1‑106
                                                                                   ACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCT                                                                                                                                                           <  1:785573/71‑1
                                                                                             GGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGC                                                                                                                                                             <  1:334870/59‑1
                                                                                               AACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGA                                                                                                                                                         <  3:339408/61‑1
                                                                                               AACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGA                                                                                                                                                         >  4:339408/1‑61
                                                                                                     CGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCT                                                                                                                            >  1:861858/1‑84
                                                                                                                                                    AGGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAA          >  2:800900/1‑151
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGC        >  1:557441/1‑151
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGC        <  1:51844/151‑1
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAG         >  4:580628/1‑150
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCA                       <  2:656877/136‑1
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATAT                                                                                                            <  2:296808/51‑1
                                                                                                                                                      GCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATAT                                                                                                            >  1:296808/1‑51
                                                                                                                                                       CCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCC       <  1:915074/151‑1
                                                                                                                                                       CCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGC        >  3:449610/1‑150
                                                                                                                                                       CCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGT                                                           >  3:25645/1‑99
                                                                                                                                                       CCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGT                                                           <  4:25645/99‑1
                                                                                                                                                        CTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCT      >  1:157418/1‑151
                                                                                                                                                        CTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCT      <  2:43078/151‑1
                                                                                                                                                         TGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTA     >  2:898132/1‑151
                                                                                                                                                         TGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTA     <  2:885109/151‑1
                                                                                                                                                         TGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCT      <  4:494055/150‑1
                                                                                                                                                         TGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCG                                      >  4:129169/1‑118
                                                                                                                                                         TGATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCG                                      <  3:129169/118‑1
                                                                                                                                                          GATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTA     >  3:46184/1‑150
                                                                                                                                                          GATGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTG                         >  2:597024/1‑130
                                                                                                                                                            TGCGACGCTTGACGCTTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCATAAAT  >  1:477723/1‑151
                                                                                                                                                            TGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAAT  <  1:646004/151‑1
                                                                                                                                                            TGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAAT  >  2:343797/1‑151
                                                                                                                                                            TGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAA   <  4:132864/150‑1
                                                                                                                                                            TGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAA   >  3:100105/1‑150
                                                                                                                                                            TGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCC                >  4:37737/1‑137
                                                                                                                                                                                                                                                                                                                   
GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/4229230‑4229386
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGACGCTTGACGCGTCTTATCAGGCCTACAGGATTCACAATATTAATACTCGTCCCGTCCTTCATCTTCATCCGGCTGTTCCAGCACACTGTAAGCCACCGAACAAAACAGCGAGTTCAGGCGCTGCATATCTCCCAGTAAGCCTAAAT  <  NC_000913_3_bme_pgi/4229405‑4229256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.