New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 42349981534 (18.020)106 (1.260) 42/270 1.7 6.5% intergenic (‑1765/‑909) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
?NC_000913_3_bme_pgi = 4235015 1523 (18.160)intergenic (‑1782/‑892) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1676 total aligned reads displayed.

CCGGCCCCGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGCCCATCCCTGA  >  NC_000913_3_bme_pgi/4234866‑4235165
                                                                                                                                                     |                                                                                                                                                      
ccGGCCCCGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGAt                                                                                                                                                       >  1:100376‑M2/1‑150 (MQ=255)
   gCCCCGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGc                                                                                                                                                    <  1:930970/151‑1 (MQ=255)
    ccccGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCa                                                                                                                                                   <  2:297181/151‑1 (MQ=255)
      ccGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCaaa                                                                                                                                                 >  1:300769/1‑151 (MQ=255)
      ccGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCaa                                                                                                                                                  >  3:145972/1‑150 (MQ=255)
            tCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGa                                                                                                                                                        >  4:454056/1‑138 (MQ=255)
            tCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGcc                                                                                                                                            >  4:3768/1‑150 (MQ=255)
            tCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGcc                                                                                                                                            >  4:25977/1‑150 (MQ=255)
             cTGGGGTGAGCCCGGTACCGATCTCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCtt                                                                                                                                          <  1:250427/151‑1 (MQ=255)
               ggggTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGc                                                                                                                                        <  2:747753/151‑1 (MQ=255)
                 ggTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCTTCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGccc                                                                                                                                      <  1:816401/151‑1 (MQ=255)
                   tGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCa                                                                                                                                     <  3:217920/150‑1 (MQ=255)
                   tGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCa                                                                                                                                     <  4:41955/150‑1 (MQ=255)
                      gCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATTCTGAGGGCAAACTGCCTTGCCCAGTc                                                                                                                                  <  4:149440/150‑1 (MQ=255)
                       cccGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTcc                                                                                                                                 <  3:275106/150‑1 (MQ=255)
                        ccGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGa                                                                                                                               >  2:59398/1‑151 (MQ=255)
                              ccAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGccc                                                                                                                                      >  1:754878/1‑138 (MQ=255)
                                 aTGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGccc                                                                                                                                      >  1:406625/1‑135 (MQ=255)
                                 aTGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGAAAGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCtgat                                                                                                                      >  1:730342/1‑151 (MQ=255)
                                  tGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCtgatg                                                                                                                     >  1:865859/1‑151 (MQ=255)
                                  tGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCtgatg                                                                                                                     <  1:357937/151‑1 (MQ=255)
                                     ccAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGaaa                                                                                                                  <  1:274770/151‑1 (MQ=255)
                                      cAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGaaa                                                                                                                  <  4:478420/150‑1 (MQ=255)
                                      cAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAg                                                                                                                 <  1:64753/151‑1 (MQ=255)
                                          aCGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCg                                                                                                             <  1:156139/151‑1 (MQ=255)
                                            gCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCa                                                                                                           <  2:355877/151‑1 (MQ=255)
                                            gCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCa                                                                                                           <  2:328792/151‑1 (MQ=255)
                                              cTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCAc                                                                                                          >  3:359937/1‑150 (MQ=255)
                                              cTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGAGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACg                                                                                                         >  1:559299/1‑151 (MQ=255)
                                                 tttCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCt                                                                                                       <  3:567507/150‑1 (MQ=255)
                                                  ttCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTg                                                                                                      <  4:202296/150‑1 (MQ=255)
                                                    ccAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGAc                                                                                                   <  1:909343/151‑1 (MQ=255)
                                                    ccAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGAc                                                                                                   <  1:438380/151‑1 (MQ=255)
                                                    ccAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGAc                                                                                                   <  2:957660/151‑1 (MQ=255)
                                                        cTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCTAAGCCCTGATGAAAGGCCGCTCGCTGGACGAgg                                                                                               <  2:238255/151‑1 (MQ=255)
                                                             gCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGcgcg                                                                                           <  4:66665/150‑1 (MQ=255)
                                                              cATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGt                                                                                          <  3:301344/150‑1 (MQ=255)
                                                              cATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTg                                                                                         >  2:384442/1‑151 (MQ=255)
                                                               aTCAGGGAACCGATACGATCCCGCTGGATTTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTg                                                                                         >  4:58220/1‑150 (MQ=255)
                                                                  aGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCaaa                                                                                                                                                 <  3:427943/91‑1 (MQ=255)
                                                                    ggAACCGATACGATCCCGCTGGAGTTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAg                                                                                                                 <  2:930407/121‑1 (MQ=255)
                                                                         cgctACGAGCCCGCTGGAATTCCTCGTGGCGCCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAg                                                                              <  2:444007/148‑1 (MQ=255)
                                                                         cGATACGATCCCGCTGGAATTCATCGTGGCGGCCAATGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCa                                                                               <  3:58838/150‑1 (MQ=255)
                                                                         cGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAg                                                                              >  2:643241/1‑151 (MQ=255)
                                                                          gATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAgg                                                                             <  2:144984/151‑1 (MQ=255)
                                                                           aTACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAg                                                                                                                                    >  2:411337/1‑95 (MQ=255)
                                                                           aTACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAgg                                                                             <  3:502812/150‑1 (MQ=255)
                                                                            tACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCa                                                                           >  1:119832/1‑151 (MQ=255)
                                                                              cGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCaaa                                                                         <  1:539410/151‑1 (MQ=255)
                                                                               gATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCaaa                                                                         >  3:523324/1‑150 (MQ=255)
                                                                               gATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAg                                                                        >  1:781760/1‑151 (MQ=255)
                                                                                aTCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAg                                                                        <  4:235656/150‑1 (MQ=255)
                                                                                 tCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGaa                                                                      >  1:600705/1‑151 (MQ=255)
                                                                                 tCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGa                                                                       >  3:194221/1‑150 (MQ=255)
                                                                                  cccGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCTCCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTCGCAGGCAAAGaa                                                                      <  4:511927/150‑1 (MQ=255)
                                                                                  cccGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCt                                                                                                                                           <  1:183279/81‑1 (MQ=255)
                                                                                  cccGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAAc                                                                     <  2:571797/151‑1 (MQ=255)
                                                                                    cGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCt                                                                                                       <  2:896151/115‑1 (MQ=255)
                                                                                     gCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCa                                                                                                                                                   >  1:329947/1‑70 (MQ=255)
                                                                                       tGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAAcctgcc                                                                <  2:517904/151‑1 (MQ=255)
                                                                                          aaTTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGAtg                                                                                                                                                      <  1:675957‑M2/62‑3 (MQ=255)
                                                                                           aTTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCg                                                            >  2:169232/1‑151 (MQ=255)
                                                                                               aTCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCg                                                         >  4:354533/1‑150 (MQ=255)
                                                                                                  gTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAg                                                     >  1:464086/1‑151 (MQ=255)
                                                                                                  gTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAg                                                     <  1:579394/151‑1 (MQ=255)
                                                                                                     gcggcCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTgg                                                  <  1:383775/151‑1 (MQ=255)
                                                                                                         ccAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAgcg                                              >  2:867863/1‑151 (MQ=255)
                                                                                                          cAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAgcgc                                             >  2:626285/1‑151 (MQ=255)
                                                                                                                ccACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGcc                                       >  1:632564/1‑151 (MQ=255)
                                                                                                                  aCGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGc                                                        >  3:69069/1‑132 (MQ=255)
                                                                                                                   cGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCg                                    >  1:503810/1‑151 (MQ=255)
                                                                                                                     aGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCa                                  <  2:119274/151‑1 (MQ=255)
                                                                                                                         gACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCaa                                                                          <  3:243745/107‑1 (MQ=255)
                                                                                                                         gACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCcccgccccgc                              >  2:770815/1‑151 (MQ=255)
                                                                                                                              tGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCt                          >  4:121468/1‑150 (MQ=255)
                                                                                                                               ggATCACCAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcacccc                                  <  2:477859‑M2/141‑119 (MQ=255)
                                                                                                                               ggATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCttt                        >  2:796617/1‑151 (MQ=255)
                                                                                                                                gATCACCAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacgggg                       <  1:208254‑M2/151‑130 (MQ=255)
                                                                                                                                gATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCttt                        >  4:400153/1‑150 (MQ=255)
                                                                                                                                  tCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTcc                     <  2:549161/151‑1 (MQ=255)
                                                                                                                                  tCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTcc                     <  1:842461/151‑1 (MQ=255)
                                                                                                                                  tCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTc                      >  3:328402/1‑150 (MQ=255)
                                                                                                                                   cACCAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacgggg                       <  2:722614‑M2/148‑130 (MQ=255)
                                                                                                                                    aCCAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacggggccgg                   <  2:200796‑M2/151‑134 (MQ=255)
                                                                                                                                    aCCAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccggg                                          >  3:95096‑M2/1‑18 (MQ=255)
                                                                                                                                    aCCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCg                    <  3:379621/150‑1 (MQ=255)
                                                                                                                                     ccAGCATGAAATGCTGGtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacggggccgg                   <  4:174641‑M2/150‑134 (MQ=255)
                                                                                                                                     ccAGCATGAAATGCTGGtgatccagtgtcggctagtggccattggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagatggaaaaaggcgtgctggccattggagacgggctcaccccagacaacggggccgg                   <  3:128021‑M2/150‑134 (MQ=255)
                                                                                                                                     ccAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGc                  >  2:67956/1‑151 (MQ=255)
                                                                                                                                       aGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTgcg                                                                                       <  2:843360/80‑1 (MQ=255)
                                                                                                                                          aTGAAATGCTGAtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacggggccggttgggc             <  2:698706‑M2/151‑140 (MQ=255)
                                                                                                                                          aTGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAAcc              >  3:40100/1‑150 (MQ=255)
                                                                                                                                           tGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTgcg                                                                                       >  3:464367/1‑76 (MQ=255)
                                                                                                                                            gAAATGCTGAtgatccagtgtcggctcgtggcccttggccgccacgatgaattccagcgggatcgtatcggttccctgatgcagaagctggaaaaaggcgtgctggccattggtgccgggctcaccccagacaacggggccggttgggcc            <  4:541240‑M2/150‑141 (MQ=255)
                                                                                                                                            gAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAg                                                                                    <  4:29687/78‑1 (MQ=255)
                                                                                                                                            gAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGcc           <  2:819939/151‑1 (MQ=255)
                                                                                                                                                  cTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGCCCATccc     >  1:700776/1‑151 (MQ=255)
                                                                                                                                                  cTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGCCCATcc      <  4:320346/150‑1 (MQ=255)
                                                                                                                                                   tgatgatccagtgtcggctcgtggcccttggccgccacgatgaatt                                                                                                             >  2:271316‑M2/1‑3 (MQ=255)
                                                                                                                                                   tGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGc            >  3:175677/1‑143 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CCGGCCCCGTTGTCTGGGGTGAGCCCGGCACCAATGGCCAGCACGCCTTTTTCCAGCTTCTGCATCAGGGAACCGATACGATCCCGCTGGAATTCATCGTGGCGGCCAAGGGCCACGAGCCGACACTGGATCACCAGCATGAAATGCTGATGGCAAACTGCCTTGCCCAGTCCGAAGCCCTGATGAAAGGCCGCACGCTGGACGAGGCGCGTGCGCAGTTGCAGGCAAAGAACCTGCCTGCGTCGCAAGTGGAGCGCATTGCCCCGCACCGCGTCTTTTCCGGCAACCGCCCATCCCTGA  >  NC_000913_3_bme_pgi/4234866‑4235165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.