New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1096961 =32 (0.860)13 (0.570)
+GGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTT
11/150 1.1 39.8% intergenic (+132/+604) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913_3_bme_pgi 1097243 = NA (NA)intergenic (+414/+322) ycdU/serX putative inner membrane protein/tRNA‑Ser

GGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCA  >  NC_000913_3_bme_pgi/1096812‑1097109
                                                                                                                                                     |                                                                                                                                                    
gggCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCAc                                                                                                                                                      <  2:448937/150‑1 (MQ=255)
 ggCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCAcc                                                                                                                                                     >  2:138949/1‑150 (MQ=255)
             aGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCaa                                                                                                                                         <  3:117227/150‑1 (MQ=255)
                         aTAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaa                                                                                                                             >  2:298544/1‑150 (MQ=255)
                                   aCCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAAtata                                                                                                                                     >  2:468123/1‑132 (MQ=255)
                                   aCCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAAtata                                                                                                                                     <  1:468123/132‑1 (MQ=255)
                                       gATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTc                                                                                                               <  3:3942/150‑1 (MQ=255)
                                                      tggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATAc                                                                                                                                    <  2:267107‑M1/19‑1 (MQ=255)
                                                      tggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATAc                                                                                                                                    >  1:267107‑M1/96‑114 (MQ=255)
                                                        gcgacagccagttggacagaccgtgaacgcagtgagcggtctgtccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAAtata                                                                                                                                     <  2:365598‑M1/18‑1 (MQ=255)
                                                        gcgacagccagttggacagaccgtgaacgcagtgagcggtctgtccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAAtata                                                                                                                                     >  1:365598‑M1/94‑111 (MQ=255)
                                                         cgacagccagttggacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                                             <  3:88730‑M1/58‑1 (MQ=255)
                                                          gTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa                                                                                            <  1:298544/150‑1 (MQ=255)
                                                              tctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTcttctt                                                                                                <  2:2611/142‑1 (MQ=255)
                                                              tctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTcttctt                                                                                                >  1:2611/1‑142 (MQ=255)
                                                                tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCGGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata                                                                                          <  1:275848/146‑1 (MQ=255)
                                                                tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata                                                                                          >  2:275848/1‑146 (MQ=255)
                                                                   ttggacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCg                                                                                                                      <  2:4360‑M1/33‑1 (MQ=255)
                                                                   ttggacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCg                                                                                                                      >  1:4360‑M1/83‑115 (MQ=255)
                                                                    gcgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGgtgt                                                                                                                                               >  3:31989/1‑89 (MQ=255)
                                                                    gcgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGgtgt                                                                                                                                               <  4:31989/89‑1 (MQ=255)
                                                                      gacagaccgtgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                                                                                <  4:221260‑M1/71‑1 (MQ=255)
                                                                         agaccgtgaacgcagtgagcggtctgtccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggg                                                                             <  1:235693‑M1/74‑1 (MQ=255)
                                                                               tgaacgcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt                                                                       >  3:221260‑M1/71‑150 (MQ=255)
                                                                                    gcagtgagcgggctgcccaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtc                                                                  >  4:88730‑M1/66‑150 (MQ=255)
                                                                                          gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcg                                                            >  3:79868/1‑150 (MQ=255)
                                                                                                aGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                                                      >  1:83179/1‑150 (MQ=255)
                                                                                                aGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                                                      >  1:222300/1‑150 (MQ=255)
                                                                                                   gacaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                                                      <  3:243681‑M1/97‑1 (MQ=255)
                                                                                                   gacaactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                                                      >  4:243681‑M1/51‑147 (MQ=255)
                                                                                                   cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg                                                   >  3:64104/1‑150 (MQ=255)
                                                                                                      aactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGgtgtgt                                                                                                                                             <  4:279321‑M1/10‑1 (MQ=255)
                                                                                                      aactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGgtgtgt                                                                                                                                             >  3:279321‑M1/48‑57 (MQ=255)
                                                                                                      aactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGaaaaaaa                                                                                                                            >  2:20403‑M1/48‑74 (MQ=255)
                                                                                                      aactggctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGaaaaaaa                                                                                                                            <  1:20403‑M1/27‑1 (MQ=255)
                                                                                                            ctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                 <  3:160433‑M1/102‑1 (MQ=255)
                                                                                                            ctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                 >  4:160433‑M1/42‑143 (MQ=255)
                                                                                                            ctgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGcc                                          <  3:269019‑M1/109‑1 (MQ=255)
                                                                                                             tgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                              <  1:149406‑M1/89‑1 (MQ=255)
                                                                                                             tgtcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                              >  2:149406‑M1/41‑129 (MQ=255)
                                                                                                              cACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCg                                        >  1:264273/1‑150 (MQ=255)
                                                                                                               tcgccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGc                                       <  1:32027‑M1/112‑1 (MQ=255)
                                                                                                               aCGATTTCCACTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGc                                       >  3:8043/1‑150 (MQ=255)
                                                                                                                 gccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGc                                                                                                                                           >  3:29367‑M1/37‑48 (MQ=255)
                                                                                                                 gccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGc                                                                                                                                           <  4:29367‑M1/12‑1 (MQ=255)
                                                                                                                 gccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                            <  2:469439‑M1/75‑1 (MQ=255)
                                                                                                                 gccagttgtcgaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                            >  1:469439‑M1/37‑111 (MQ=255)
                                                                                                                       cccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                            >  2:206427/1‑105 (MQ=255)
                                                                                                                       cccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                            <  1:206427/105‑1 (MQ=255)
                                                                                                                        ccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                              <  2:264273/150‑1 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAg                                                                                                        <  4:150593‑M1/47‑1 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAg                                                                                                        >  3:150593‑M1/27‑73 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                                             <  4:37011‑M1/58‑1 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                                             >  3:37011‑M1/27‑84 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt                                  <  1:6012‑M1/117‑1 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt                                  >  2:6012‑M1/27‑143 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa                           >  1:241653‑M1/27‑150 (MQ=255)
                                                                                                                           gaaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa                           >  1:336122‑M1/27‑150 (MQ=255)
                                                                                                                           cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa                           <  2:222300/150‑1 (MQ=255)
                                                                                                                            gCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                                                                                <  4:168616/96‑1 (MQ=255)
                                                                                                                            gCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                                                                                >  3:168616/1‑96 (MQ=255)
                                                                                                                            aaccccggtcggggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAc                          >  1:400727‑M1/26‑150 (MQ=255)
                                                                                                                               cccggtcggggcttctcatcccCCCGGTGCGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                       >  4:269019‑M1/23‑150 (MQ=255)
                                                                                                                                tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc                      <  1:138949/150‑1 (MQ=255)
                                                                                                                                 cggtcggggcttctcatcccCCCGGTGTGTGCAATATACGaaaaaaaa                                                                                                                           >  4:37723‑M1/21‑48 (MQ=255)
                                                                                                                                  aCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtctt                                                                                                   >  2:212576/1‑71 (MQ=255)
                                                                                                                                  aCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtctt                                                                                                   <  1:212576/71‑1 (MQ=255)
                                                                                                                                   cAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                   <  4:79868/150‑1 (MQ=255)
                                                                                                                                        ggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAg                                                                                                                          >  4:121908‑M1/14‑42 (MQ=255)
                                                                                                                                        ggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAg                                                                                                                          <  3:121908‑M1/29‑1 (MQ=255)
                                                                                                                                        ggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                   >  1:380200‑M1/14‑145 (MQ=255)
                                                                                                                                        ggcttctcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                   <  2:380200‑M1/132‑1 (MQ=255)
                                                                                                                                              tcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                               >  4:262091‑M1/8‑79 (MQ=255)
                                                                                                                                              tcatcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                               <  3:262091‑M1/72‑1 (MQ=255)
                                                                                                                                               catcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                              <  1:398470‑M1/121‑1 (MQ=255)
                                                                                                                                               catcccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                              >  2:398470‑M1/7‑127 (MQ=255)
                                                                                                                                                  cccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACCTCCGTACGAGCTCAGCTTTAAATATGGAGGTCAGAGGCGGATTGACTCGCTTCGCAACCCCTGCGGGCAGGCCGCTCACTGCGTTCAAGGTCTGTCAAACTGGCTGTCGc    <  1:21013‑M1/147‑1 (MQ=255)
                                                                                                                                                   ccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGt       >  2:151114‑M1/3‑146 (MQ=255)
                                                                                                                                                   ccCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGt       <  1:151114‑M1/144‑1 (MQ=255)
                                                                                                                                                    cCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa  >  3:70120‑M1/2‑150 (MQ=255)
                                                                                                                                                    cCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa  >  2:32027‑M1/2‑150 (MQ=255)
                                                                                                                                                    cCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa  <  4:199626‑M1/149‑1 (MQ=255)
                                                                                                                                                    aCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                                                                                >  1:189955/1‑72 (MQ=31)
                                                                                                                                                    aCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                                                                                <  2:189955/72‑1 (MQ=31)
                                                                                                                                                     |                                                                                                                                                    
GGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCA  >  NC_000913_3_bme_pgi/1096812‑1097109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.