New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 4235426 =NA (NA)9 (0.260) 9/230 2.6 NA noncoding (5/77 nt) REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_bme_pgi 4235456 = NA (NA)noncoding (35/77 nt) REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 794 total aligned reads displayed.

GGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAAT  >  NC_000913_3_bme_pgi/4235277‑4235573
                                                                                                                                                     |                                                                                                                                                   
  ggCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGCCGCTTCCACGCCAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGCCATGTCGGCCG                                                                                                                                                  >  2:384987‑M1/1‑150 (MQ=255)
   gCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGTGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGG                                                                                                                                                 <  1:230725‑M1/150‑1 (MQ=255)
       ggAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa                                                                                                                                             >  4:106620/1‑150 (MQ=255)
           cTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                                                                                         >  2:267995/1‑150 (MQ=255)
              ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                                                                                      <  1:245107/150‑1 (MQ=255)
                  aGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGc                                                                                                                                          <  1:82518/142‑1 (MQ=255)
                    gAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGC                                                                                                                                                    >  2:322268‑M1/1‑130 (MQ=255)
                     aaCTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                                               >  4:241220/1‑150 (MQ=255)
                       cTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATgcggcgtgaacgccttat                                                                                                                             <  1:364536‑M1/150‑19 (MQ=255)
                        tGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatc                                                                                                                            <  1:408635‑M2/150‑4 (MQ=255)
                          gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                                                          <  4:44252‑M2/150‑6 (MQ=255)
                            gACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccggc                                                                                                                        <  1:313388‑M2/150‑8 (MQ=255)
                              cGGAACTTTTGCCGGTTGTATAGGGCAAGGAAGGGGCGAGTGGTCGCCACGCAACAACGCTAGGCCTAGAAGAGCATCAGCCTTCGCCAAGGAATGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                                                                      <  1:167595/150‑1 (MQ=25)
                                   cTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGTGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                                                                                 <  1:292058/150‑1 (MQ=255)
                                    ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                                                                                >  4:145013/1‑150 (MQ=255)
                                      ttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                                                                              <  2:363064/150‑1 (MQ=255)
                                       tGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                                                                                             <  2:285047/150‑1 (MQ=255)
                                        gCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               <  1:212656/147‑1 (MQ=255)
                                        gCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTg                                                                                                            >  3:197681/1‑150 (MQ=255)
                                          aagtcttATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt                                                                                                          <  2:63736/144‑1 (MQ=255)
                                           ggTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               >  2:198480/1‑144 (MQ=255)
                                                    gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt                                                                                                >  1:306040/1‑150 (MQ=255)
                                                     ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               <  3:232808/134‑1 (MQ=255)
                                                     ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGACGCGAccgcgtc                                                                                               >  2:225542/1‑144 (MQ=39)
                                                     ggCAAGGAAGGGGCGAGTGGTCGCGACGCGTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATAGCCGATGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTc                                                                                               >  4:130496/1‑150 (MQ=38)
                                                      gCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                                                          >  4:125305‑M2/1‑117 (MQ=255)
                                                        aaggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               <  3:219338/131‑1 (MQ=255)
                                                                ggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                                                          >  3:130246‑M2/1‑107 (MQ=255)
                                                                ggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa                                                                                    >  2:52622/1‑150 (MQ=255)
                                                                ggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa                                                                                    <  2:338001/150‑1 (MQ=255)
                                                                 gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAttct                                                                                   >  1:282180/1‑147 (MQ=255)
                                                                  cGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                                                                                  <  2:470226/150‑1 (MQ=255)
                                                                    ttaattgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGc                                                                                                                                                    >  2:140732‑M1/82‑83 (MQ=255)
                                                                    ttaattgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGc                                                                                                                                                    <  1:140732‑M1/2‑1 (MQ=255)
                                                                      tGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa                                                                              <  2:73963/150‑1 (MQ=255)
                                                                       ggTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc                                                                             <  4:164418/150‑1 (MQ=255)
                                                                       attgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGc                                                                                                                                                    <  4:179144‑M1/2‑1 (MQ=255)
                                                                        gTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGTGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa                                                                            >  4:202636/1‑150 (MQ=255)
                                                                         tCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAgg                                                                                                                                           <  3:14281/86‑1 (MQ=255)
                                                                           gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCTATATTTAGGCCGTATAAGGCGGGCACGCCGCATCCGGCAACCGATGCCTGATTCGACGCGGTCGCGTCTTATCAGGCCTACACGt                                                                         >  3:290256/1‑150 (MQ=37)
                                                                           gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                                                                                       <  1:104907/88‑1 (MQ=255)
                                                                           gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                                                                                 >  1:438587/1‑142 (MQ=255)
                                                                           gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt                                                                         >  3:91652/1‑150 (MQ=255)
                                                                             gACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATgcggcgtgaacgccttatccggccta                                                                                                                     <  2:392668‑M1/104‑27 (MQ=255)
                                                                                tacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGCCg                                                                                                                                                  <  1:54398‑M1/4‑1 (MQ=255)
                                                                                gCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               >  1:250294/1‑107 (MQ=255)
                                                                                  ttCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                                                          >  2:86683‑M2/1‑89 (MQ=255)
                                                                                   tCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg                                                                 >  2:2961/1‑150 (MQ=255)
                                                                                    ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                                               >  2:461429/1‑103 (MQ=255)
                                                                                    ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGa                                                                >  1:422117/1‑150 (MQ=255)
                                                                                        gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                                                                                     <  1:11855/125‑1 (MQ=255)
                                                                                           aGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTAc                                                         <  2:345829/150‑1 (MQ=255)
                                                                                            ctttccttcgcgcatgcagatgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACa                                                        >  1:456762‑M2/28‑150 (MQ=255)
                                                                                             ggCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                                                                                      <  3:281918/71‑1 (MQ=255)
                                                                                             ggCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                                                                                                                   >  4:86054/1‑74 (MQ=255)
                                                                                               cTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑CTCATAGTGGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCg                                                     >  1:13013/1‑150 (MQ=255)
                                                                                                  ttcgcgcatgcagatgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAt                                                  >  3:174185‑M2/22‑150 (MQ=255)
                                                                                                  ttcgcgcatgcagatgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAt                                                  >  1:71180‑M2/22‑150 (MQ=255)
                                                                                                   TCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAtt                                                 >  3:106634‑M1/1‑150 (MQ=255)
                                                                                                    CGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                                                                                    <  1:339655‑M1/98‑1 (MQ=255)
                                                                                                     GCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCg                                               >  2:423832‑M1/1‑150 (MQ=255)
                                                                                                     GCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCg                                               <  2:152930‑M1/150‑1 (MQ=255)
                                                                                                       GCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGc                                             <  2:186545‑M1/150‑1 (MQ=255)
                                                                                                       GCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGc                                             >  1:100458‑M1/1‑150 (MQ=255)
                                                                                                       GCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCACATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGc                                             <  1:203429‑M1/150‑1 (MQ=255)
                                                                                                         ATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCCGGCCTACAGGTCGATGCCGGTATGTACATCGTATTCGGCaa                                           <  1:265484‑M1/150‑1 (MQ=255)
                                                                                                         ATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCgtattccataa                                           <  1:330549‑M1/150‑6 (MQ=255)
                                                                                                          TCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                                          >  3:152323‑M1/1‑150 (MQ=255)
                                                                                                          TCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                                          >  1:190933‑M1/1‑150 (MQ=255)
                                                                                                           cTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGa                                                                <  1:348988/127‑1 (MQ=255)
                                                                                                             gCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa                                                                                                                                             >  3:62982/1‑48 (MQ=38)
                                                                                                               atgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATa                                     <  3:163542‑M2/142‑1 (MQ=255)
                                                                                                               atgcgcgaAGGAAAGCCTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATa                                     >  2:245710‑M2/9‑150 (MQ=255)
                                                                                                                  cgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt                                                                                           >  2:405353‑M2/6‑93 (MQ=255)
                                                                                                                   gcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCtt                                                                                        >  4:248344‑M2/5‑95 (MQ=255)
                                                                                                                   gcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa                                 >  4:58112‑M2/5‑150 (MQ=255)
                                                                                                                     gaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                                                                                     >  1:467675‑M2/3‑96 (MQ=255)
                                                                                                                         gAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                                                                                 <  1:15380/96‑1 (MQ=255)
                                                                                                                         gAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACga                           >  2:163636/1‑150 (MQ=255)
                                                                                                                         gAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACga                           >  3:184018/1‑150 (MQ=255)
                                                                                                                         gAAAGCCTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCTGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc                                                                   >  4:222399/1‑110 (MQ=21)
                                                                                                                          aaaGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg                                                                 <  2:439820/111‑1 (MQ=255)
                                                                                                                             gCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACgattga                       >  4:112039/1‑150 (MQ=255)
                                                                                                                                ttgatcagcgtcGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgat                     >  1:384987‑M2/4‑144 (MQ=255)
                                                                                                                                  gatcatcgTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgc                   <  4:153889‑M2/149‑9 (MQ=255)
                                                                                                                                   atcatcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat                                                             <  2:306447/107‑1 (MQ=255)
                                                                                                                                   atcatcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgct                  >  4:71686‑M2/1‑141 (MQ=255)
                                                                                                                                   atcatcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgct                  >  2:13013‑M2/1‑141 (MQ=255)
                                                                                                                                     catcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgct                  >  3:25663‑M2/1‑139 (MQ=255)
                                                                                                                                       tcgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa                                 >  3:4831/1‑131 (MQ=255)
                                                                                                                                        cgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt                                                                                                          <  3:115372/57‑1 (MQ=255)
                                                                                                                                        cgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgctgccaa             >  4:279989‑M2/1‑136 (MQ=255)
                                                                                                                                         gtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAgg                         >  2:20766‑M2/1‑135 (MQ=255)
                                                                                                                                           cgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgctgccaactt          <  1:392710‑M2/150‑18 (MQ=255)
                                                                                                                                               atGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgctgccaacttactg      <  2:255296‑M2/150‑22 (MQ=255)
                                                                                                                                                  tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTa                                                   <  3:74547/102‑1 (MQ=255)
                                                                                                                                                   aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGAggtgatgctgccaacttactgattt  <  2:106356‑M2/150‑26 (MQ=255)
                                                                                                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGc                                             >  2:100648/1‑106 (MQ=255)
                                                                                                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAg                                >  3:246434/1‑119 (MQ=255)
                                                                                                                                                     GCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGa                                                                <  2:116302‑M1/86‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAAT  >  NC_000913_3_bme_pgi/4235277‑4235573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.