New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 4235376 =NA (NA)28 (0.810) 17/228 1.2 NA intergenic (‑2143/‑531) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
?NC_000913_3_bme_pgi 4235396 = NA (NA)intergenic (‑2163/‑511) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein

Only 100 of 809 total aligned reads displayed.

AGATTTTCGGCATCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCAC  >  NC_000913_3_bme_pgi/4235247‑4235546
                                                                                                                                                     |                                                                                                                                                      
atacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttcctTCGCGCATCTGCATGCGCGaa                                                                                                                                                        >  2:90598‑M1/130‑150 (MQ=255)
atacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttccgTCGCGCATCTGCATGCGCGaa                                                                                                                                                        >  1:240893‑M1/130‑150 (MQ=255)
    gatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttcctTCGCGCATCTGCATGCGCGaa                                                                                                                                                        <  1:326493‑M1/21‑1 (MQ=255)
      tgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttcctTCGCGCATCTGCATGCGCGAAGGAAAg                                                                                                                                                  >  1:456762‑M1/124‑150 (MQ=255)
       cGGCATCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGc                                                                                                                                                 <  2:136022/150‑1 (MQ=255)
        ggCATCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGCGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCt                                                                                                                                                >  2:311323/1‑150 (MQ=255)
          catatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttccttcgcgcatgcagatgcgcgaAGGAAAGCTTg                                                                                                                                              <  2:205998‑M2/11‑1 (MQ=255)
                tGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑atcatc                                                                                                                                       <  1:120558/150‑1 (MQ=255)
                tGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑atcatc                                                                                                                                       >  1:188551/1‑150 (MQ=255)
                  ccTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCAtcgt                                                                                                                                     >  2:231571/1‑150 (MQ=255)
                    ttCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGa                                                                                                                                             >  1:134649/1‑141 (MQ=255)
                    ttCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCAtcgtcg                                                                                                                                   >  2:190933/1‑150 (MQ=255)
                    ttCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACACAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGaaa                                                                                                                                                   <  3:189605/135‑1 (MQ=255)
                     tCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGa                                                                                                                                  <  2:298420/150‑1 (MQ=255)
                         tCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGa                                                                                                                                  >  4:176727/1‑146 (MQ=255)
                            aTGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAg                                                                                                                           >  4:109482/1‑150 (MQ=255)
                                ggCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCG                                                                                                                       <  2:325705‑M1/150‑1 (MQ=255)
                                 gCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGTGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGG                                                                                                                      <  1:230725‑M1/150‑1 (MQ=255)
                                   gTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGatc                                                                                                                                           >  4:21488/1‑126 (MQ=255)
                                     ggAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCAtcgtc                                                                                                                                    <  3:178166/132‑1 (MQ=255)
                                      gAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAg                                                                                                                 <  1:445022/150‑1 (MQ=255)
                                        aCTGGGGAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGAGGTCGCGACGCCTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGCTATGTAGGCCGGCTAAgga                                                                                                               >  2:335749/1‑149 (MQ=255)
                                           gggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                                                            >  2:5987/1‑150 (MQ=255)
                                              tAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGaa                                                                                                                                                        >  4:88131/1‑104 (MQ=255)
                                              tAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAc                                                                                                         >  1:297551/1‑150 (MQ=255)
                                                 ggAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCtt                                                                                                                                               <  4:197444/110‑1 (MQ=255)
                                                   aaCTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGat                                                                                                                                 >  2:102851/1‑121 (MQ=255)
                                                     cTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGat                                                                                                                                 <  1:410015/119‑1 (MQ=255)
                                                     cTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGat                                                                                                                                 >  2:410015/1‑119 (MQ=255)
                                                     cTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATgcggcgtgaacgccttat                                                                                                  <  1:364536‑M1/150‑19 (MQ=255)
                                                        gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGACGGGGCGAGCGGCCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCCCatccg                                                                                               <  2:453716‑M2/150‑6 (MQ=255)
                                                        gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                               <  3:114975‑M2/150‑6 (MQ=255)
                                                        gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                               >  1:252172‑M2/1‑145 (MQ=255)
                                                        gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                               >  2:48912‑M2/1‑145 (MQ=255)
                                                        gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑atcatc                                                                                                                                       <  1:89261/110‑1 (MQ=255)
                                                        gCGACGGAACTTTTGACGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCgtccg                                                                                               >  2:392136‑M2/1‑145 (MQ=255)
                                                         cGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccgg                                                                                              <  1:206041‑M2/150‑7 (MQ=255)
                                                               atcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttccttcgcgcatgcagatgcgcgaa                                                                                                                                                        >  3:26765‑M2/87‑87 (MQ=255)
                                                               atcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgatcaagctttcctTCGCGCATCTGCATGCGCGaa                                                                                                                                                        <  3:200333‑M1/21‑1 (MQ=255)
                                                                  ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCACATCTGCATGCGCGAAGGAAAGCTTG‑ATCAtcgtc                                                                                                                                    >  3:89947/1‑103 (MQ=255)
                                                                   tttGCCTGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACACCGCATCCGGCAACCGATGc                                                                                    >  2:173391/1‑150 (MQ=255)
                                                                    ttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                                                   <  2:363064/150‑1 (MQ=255)
                                                                         ggTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGat                                                                                                                                            >  3:36283/1‑88 (MQ=255)
                                                                         ggTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATgcggcgtgaacgccttat                                                                                                  <  1:71420‑M1/130‑19 (MQ=255)
                                                                              tATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                    <  2:113583/139‑1 (MQ=255)
                                                                               aTCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                                                        >  1:474146/1‑150 (MQ=255)
                                                                                tCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                                                       <  4:122832/150‑1 (MQ=255)
                                                                                 cGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                                                      <  1:196690/150‑1 (MQ=255)
                                                                                   ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGc                                                                                                                                                 <  3:130455/74‑1 (MQ=255)
                                                                                   ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTg                                                                                                                                              <  1:273679/77‑1 (MQ=255)
                                                                                   ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                    <  3:232808/134‑1 (MQ=255)
                                                                                     cAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCACATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                                                                  <  1:396453/150‑1 (MQ=255)
                                                                                        ggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                                                               <  2:197174/150‑1 (MQ=255)
                                                                                             gggCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTTCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                                                          >  4:233149/1‑150 (MQ=255)
                                                                                               gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc                                                                             <  2:246733/129‑1 (MQ=255)
                                                                                               gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                                                        <  3:282145/150‑1 (MQ=255)
                                                                                               gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGCTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                                                        >  2:75780/1‑150 (MQ=255)
                                                                                                    tGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa                                                   >  4:145016/1‑150 (MQ=255)
                                                                                                      gTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGa                                                                                                                                  <  3:48028/69‑1 (MQ=255)
                                                                                                         gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                               <  1:462568‑M2/101‑6 (MQ=255)
                                                                                                         gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCatccg                                                                                               >  2:462568‑M2/1‑96 (MQ=255)
                                                                                                         gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                                                            >  3:215067/1‑88 (MQ=255)
                                                                                                         gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                                                      <  2:438587/142‑1 (MQ=255)
                                                                                                         gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt                                              <  4:246528/150‑1 (MQ=255)
                                                                                                           gACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAg                                                                                                                                                       >  2:122370/1‑44 (MQ=255)
                                                                                                           gACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt                                                                     <  2:25863/125‑1 (MQ=255)
                                                                                                            aCGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa                                           <  1:213019/150‑1 (MQ=255)
                                                                                                            aCGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa                                           <  1:381104/150‑1 (MQ=255)
                                                                                                             cGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGAt                                          <  1:110452/150‑1 (MQ=255)
                                                                                                              gCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg                                         <  1:286950/150‑1 (MQ=255)
                                                                                                               cTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGGTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc                                        >  2:384960/1‑150 (MQ=255)
                                                                                                                ttCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc                                       >  3:251832/1‑150 (MQ=255)
                                                                                                                  ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                                                    <  1:334990/103‑1 (MQ=255)
                                                                                                                  ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa                                                   <  3:149835/136‑1 (MQ=255)
                                                                                                                    aCGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGa                                                                                                                                  <  2:288977/55‑1 (MQ=255)
                                                                                                                    aCGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata                                   >  4:134097/1‑150 (MQ=255)
                                                                                                                     cGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat                                  >  1:164043/1‑150 (MQ=255)
                                                                                                                      gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATg                                 >  2:64514/1‑150 (MQ=255)
                                                                                                                      gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATg                                 >  1:151442/1‑150 (MQ=255)
                                                                                                                        aaGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa                                                                           <  4:37955/106‑1 (MQ=255)
                                                                                                                         aGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTAc                              <  2:345829/150‑1 (MQ=255)
                                                                                                                          gggCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAt                                                           <  4:272498/120‑1 (MQ=255)
                                                                                                                           ggCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt                            >  4:163542/1‑150 (MQ=255)
                                                                                                                            ttccttcgcgcatgcagatgcgcgaCGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                                                      >  2:272872‑M2/26‑123 (MQ=255)
                                                                                                                            gCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATc                           >  3:16045/1‑150 (MQ=255)
                                                                                                                            gCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATc                           <  3:167296/150‑1 (MQ=255)
                                                                                                                                gTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                                                        >  1:306180/1‑117 (MQ=255)
                                                                                                                                 TCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAtt                      <  1:56631‑M1/150‑1 (MQ=255)
                                                                                                                                 TCGCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAtt                      >  3:106620‑M1/1‑150 (MQ=255)
                                                                                                                                   GCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGat                                    >  4:7508‑M1/1‑134 (MQ=255)
                                                                                                                                   GCGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCg                    <  2:152930‑M1/150‑1 (MQ=255)
                                                                                                                                    CGCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                                                      <  3:67751‑M1/115‑1 (MQ=255)
                                                                                                                                     GCATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGc                  >  1:100458‑M1/1‑150 (MQ=255)
                                                                                                                                       ATCTGCATGCGCGAAGGAAAGCTTGA‑TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCCGGCCTACAGGTCGATGCCGGTATGTACATCGTATTCGGCaa                <  1:265484‑M1/150‑1 (MQ=255)
                                                                                                                                            cATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTca                                                              >  4:101057/1‑98 (MQ=255)
                                                                                                                                            cATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg                                      >  1:345165/1‑123 (MQ=255)
                                                                                                                                            cATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt           >  2:214975/1‑150 (MQ=255)
                                                                                                                                             atgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATa          >  3:81694‑M2/9‑150 (MQ=255)
                                                                                                                                              tgcgcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATAc         >  1:429985‑M2/8‑150 (MQ=255)
                                                                                                                                                 gcgaAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa      >  4:58112‑M2/5‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
AGATTTTCGGCATCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCAC  >  NC_000913_3_bme_pgi/4235247‑4235546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.