| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | 1242091 = | 41 (0.680) | 5 (0.090) | 3/276 | 7.4 | 11.0% | intergenic (‑20/+75) | cvrA/ldcA | putative cation/proton antiporter/murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | NC_000913_3_bme_pgi | 1242139 = | 43 (0.770) | intergenic (‑68/+27) | cvrA/ldcA | putative cation/proton antiporter/murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATG > NC_000913_3_bme_pgi/1241955‑1242237 | cAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTtat > 1:10782/1‑150 (MQ=255) aaTAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGCTCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATaacc < 1:351010/150‑3 (MQ=255) aaTAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAAc > 2:495417/1‑150 (MQ=255) aTAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAAcc > 2:785126/1‑150 (MQ=255) cAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTAcc < 2:581712/150‑1 (MQ=255) cAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTAcc > 1:760164/1‑150 (MQ=255) aGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCa < 1:411806/150‑1 (MQ=255) tGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGc < 1:836544/150‑1 (MQ=255) gCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTGGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCa < 1:895496/150‑1 (MQ=255) cAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCCACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCaga > 2:196013/1‑150 (MQ=255) cAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGAACCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCaga > 2:853563/1‑150 (MQ=255) cAAGACGGGAAGAAAATGAACTAACTAATATACTGCTGGTGACAAGGATGGATACTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCaga < 2:124359/150‑1 (MQ=255) aaGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACACGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCagag < 1:786555/150‑1 (MQ=255) aaGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCagag < 1:220940/150‑1 (MQ=255) gaaAATGAACTTAGTAATATACTGCTGGTTACATGGTTGGATCCTAAGATGAAAAGGCTAATTTTTGTTGTGGCATCCAAGGGTCGGTGACTCCTGATTACGCTGGCTCTTATATAACCCCTACCATATTAGCTGCAGAGACAGCGtttt < 2:96579/150‑1 (MQ=255) aaaaTGAACTAAGTTATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTAACATATTAGCGGCAGAGACAGCGTTTTa < 1:842560/150‑1 (MQ=255) tGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTa > 1:727488/1‑150 (MQ=255) tGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGAATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTa > 1:216490/1‑150 (MQ=255) gAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAg > 1:623903/1‑150 (MQ=255) cTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCAGCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGccc < 1:827301/150‑1 (MQ=255) aaGTAATATACTGCTGGGGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCCTCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTg < 2:536349/150‑1 (MQ=255) atatACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCg < 1:693853/150‑1 (MQ=255) aCTGCAGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGAt < 2:327571/150‑1 (MQ=255) tgGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGAtttttt < 1:785126/150‑1 (MQ=255) tGACAAGGATGGATCCTAAGATGAAAAGCCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTAc < 2:835528/150‑1 (MQ=255) aGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACAtttt < 1:609457/150‑1 (MQ=255) tggatCCTAAGATGAAAAGGCTAATTATTGTTGTGGCCTCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGa > 2:295314/1‑150 (MQ=255) gatCCTAAGATGAAAAGGCTAATTTTTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAAc < 2:760164/150‑1 (MQ=255) ccTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAgg > 1:927191/1‑150 (MQ=255) aGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGa > 1:884867/1‑150 (MQ=255) aaaGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGCAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCTCTa > 2:893583/1‑150 (MQ=255) aaTTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCa < 2:623903/150‑1 (MQ=255) ttgttgTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGa > 1:21162/1‑150 (MQ=255) ggtcggtTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGtt > 2:705274/1‑150 (MQ=255) tcggtTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGACCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAATCACTTCACTTGTGTTAt > 2:191422/1‑150 (MQ=255) tACTCCTGATTACGATGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTAGTTAGCGCTGAAGCGTGATTTTTTTACATTTTTAGAACTGGATGACCGATAATCGTCATCTGAGTGCCTTCCCGGGTGTTATTCAgt < 1:145881/150‑2 (MQ=255) cTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAAGAGGATGACCGCTAATCGTCAAATGAGAGCCTTCCCGGGTGTAATTCAGAAt > 2:503322/1‑150 (MQ=255) cTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGCAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGc < 1:196013/150‑1 (MQ=255) cTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGc < 1:853563/150‑1 (MQ=255) gATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTGAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCAt > 2:583212/1‑150 (MQ=255) aTTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCAtg < 2:10782/150‑1 (MQ=255) | CAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCCAACGGTCGGTTACTCCTGATTACGCTGTCTCTTATATAAACCCTACCATATTAGCGGCAGAGACAGCGTTTTACTTAGCCCTGAAGCGTGATTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATG > NC_000913_3_bme_pgi/1241955‑1242237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |