New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 291989840 (0.840)4 (0.090) 4/266 6.3 9.8% coding (849/1341 nt) gudX glucarate dehydratase‑related protein, substrate unknown
?NC_000913_3_bme_pgi = 2919907 36 (0.800)coding (840/1341 nt) gudX glucarate dehydratase‑related protein, substrate unknown
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCCCCAGTCGTCGCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGCTTCATCAAGCAGCCAT  >  NC_000913_3_bme_pgi/2919750‑2920033
                                                                                                                                                    |                                                                                                                                       
gCCCCCAGTCGTCGCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCCATCATGTTAGTCGCGACGGGc                                                                                                                                         >  2:530723/1‑149 (MQ=255)
  ccccAGTCGTCGCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCaa                                                                                                                                       <  1:277609/149‑1 (MQ=255)
  ccccAGTCGTCGCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCaa                                                                                                                                       >  2:240657/1‑149 (MQ=255)
      aggcgtcgCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCg                                                                                                                                   <  1:161365/146‑1 (MQ=255)
             gCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGccc                                                                                                                            <  1:66521/149‑1 (MQ=255)
             gCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATAACCGCATGAAACACGTCCCACCAGACGGTGGCGATCAGGTTAGTCGGGACGGGCAAGCCGGTCGccc                                                                                                                            >  1:784257/1‑149 (MQ=255)
                aaGCTGCGCCACACGGACTGCACAGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTc                                                                                                                         <  2:414458/149‑1 (MQ=255)
                   cTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCgca                                                                                                                      >  2:443626/1‑147 (MQ=255)
                        ccACGCGGACTGCGCCGGAAAGGGTGCAGAAGGGCGGATCGGCAAGTGGAATATCTACCGCATTGACCATCACCGCATGACCCATTTCGTGCCAGTTGGTGGCGATTATGTTAGTTGCGTCGGGCAAGCCGGTCGCCTGTCGAAATTcc                                                                                                                 <  2:75796/149‑1 (MQ=255)
                               gACTGCACCGGAAAGCGACCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCa                                                                                                          <  2:643830/149‑1 (MQ=255)
                                  tGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTTGCGAACCTGTTAGTCGCGACGGGCAAGCCCGTCGCCCGTCGACATTCCGCCATGACta                                                                                                       >  2:790188/1‑148 (MQ=255)
                                    cACCGGAAAGCGTCCAGAAGTACGGATCGGCAAGTGGAATATCTACCGCATAGAGCATCACCGCATGACCCATTTCGCGCCAGTCGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCATCGAAATTCCGCCATCACTTCa                                                                                                     <  1:584735/149‑1 (MQ=255)
                                     aCCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCCAAACGGGCGCCCGTCGAAATTCCGCCATCACTTCAc                                                                                                    <  2:602586/149‑1 (MQ=255)
                                               gTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGaa                                                                                          >  1:92825/1‑149 (MQ=255)
                                                  cAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACtgc                                                                                                      >  2:431878/1‑132 (MQ=255)
                                                  cAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACtgc                                                                                                      <  1:431878/134‑3 (MQ=255)
                                                            gATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTgcg                                                                             >  1:832195/1‑149 (MQ=255)
                                                                   aaGTGGAATATCTACCGCATTGAGCAGCACCGCATGACCCATTTCGCCCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACGTCACGTCCGCAAAAGCCCTGTTCTGCCCCGCATg                                                                      >  2:218764/1‑149 (MQ=255)
                                                                       ggAATATCTCCCGCATTGGGCATCATCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATc                                                                  <  1:320294/149‑1 (MQ=255)
                                                                            atccaacGCATTGAGCATCAGCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCgg                                                             <  2:20506/143‑1 (MQ=255)
                                                                             tCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCGGTTGGTGGCGATCATGATAGTCGCCACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTACGCAGAAGCCCTGTTCTGCGCCGCATGAATCTTCGGc                                                            >  2:514274/1‑149 (MQ=255)
                                                                               tACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCCCCGCATGGATCTTCggata                                                          >  1:400931/1‑146 (MQ=255)
                                                                                aCCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATa                                                         >  1:723281/1‑149 (MQ=255)
                                                                                 ccGCATTGAGCATCACCGCATTACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAg                                                        <  2:116139/149‑1 (MQ=255)
                                                                                 ccGCATCGAGCATCACCGCATGACCCATTTCGCCCCAGTTGGTGGCGATCATGTTAGTAGCGACGGGCAAGCCGGTCGCCCGTCGAAATCCCGCCCTCACTTCACGTCCGGAGAAGCCCTGTTCTGCACCCCCTGGCTCTCCGGCACAg                                                        >  2:499912/1‑149 (MQ=255)
                                                                                            aTCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAAcatc                                             >  1:512917/1‑149 (MQ=255)
                                                                                             tCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGCGAAGCCCTGTTCTCCGCCGCATGGCTCTTCGGCATAGGTAAGAAcatca                                            >  1:95954/1‑149 (MQ=255)
                                                                                             tCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAAcatca                                            <  1:240657/149‑1 (MQ=255)
                                                                                              cACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAAcatcat                                           <  1:790188/149‑1 (MQ=255)
                                                                                               atcGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCAtt                                          <  1:751812/147‑1 (MQ=255)
                                                                                                ccGCATGACCCATTTCGCGCCAGTTGGAGGAGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTc                                         >  2:263542/1‑149 (MQ=255)
                                                                                                   cATGACCCATTTCGCGCCAGTTGGTGGCGATCCAGTTAGTCGCCGGGGGCAAGCCGGTCGCCCGTCGAAATTCCTCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGc                                      <  1:155562/149‑1 (MQ=255)
                                                                                                        cccaccacgcgCCAGGTGGCAGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCttt                                 <  1:17497/142‑1 (MQ=255)
                                                                                                         ccATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATAACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGAGCTTCGGCATCGGTAAGAACATCATTCAGCCCTTTg                                >  1:25646/1‑149 (MQ=255)
                                                                                                           agttCGCCCCCGCTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGATATTCCGCCATCACTTCACGTTCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGACCATCATTCAGCCCGTTGCa                              <  2:15901/147‑1 (MQ=255)
                                                                                                                 cgcCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCCGCCCTTTGCATAAAGa                        >  1:704324/1‑149 (MQ=255)
                                                                                                                  gcCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGaa                       >  1:774251/1‑149 (MQ=255)
                                                                                                                     aGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTAGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGAATAGGTAAGGACATCATTCAGCCCTTTTTATGAAGAAATg                    >  2:239675/1‑149 (MQ=255)
                                                                                                                       ttGGTGGCTATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGc                  <  1:176271/149‑1 (MQ=255)
                                                                                                                                 tCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGCTTCATCAagc        >  1:751258/1‑149 (MQ=255)
                                                                                                                                  cATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGCTTCATCAagca       <  1:782560/149‑1 (MQ=255)
                                                                                                                                       tAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGCTTCATCAAGCAGCCAt  <  2:751258/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                       
GCCCCCAGTCGTCGCAAAGCTGCGCCACACGGACTGCACCGGAAAGCGTCCAGAAGTGCGGATCGGCAAGTGGAATATCTACCGCATTGAGCATCACCGCATGACCCATTTCGCGCCAGTTGGTGGCGATCATGTTAGTCGCGACGGGCAAGCCGGTCGCCCGTCGAAATTCCGCCATCACTTCACGTCCGGAGAAGCCCTGTTCTGCGCCGCATGGATCTTCGGCATAGGTAAGAACATCATTCAGCCCTTTGCATAAAGAAATGGCTTCATCAAGCAGCCAT  >  NC_000913_3_bme_pgi/2919750‑2920033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.