New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 315889957 (1.200)4 (0.090) 4/266 6.3 6.9% intergenic (+15/+28) yqhH/ygiQ outer membrane lipoprotein, Lpp paralog/Radical SAM superfamily protein
?NC_000913_3_bme_pgi = 3158913 55 (1.230)intergenic (+29/+14) yqhH/ygiQ outer membrane lipoprotein, Lpp paralog/Radical SAM superfamily protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTA  >  NC_000913_3_bme_pgi/3158758‑3159044
                                                                                                                                             |                                                                                                                                                 
gCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCggcaactga                                                                                                                                            >  2:679506/1‑142 (MQ=255)
    gATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAg                                                                                                                                        >  2:287447/1‑149 (MQ=255)
       atGAAAGCACTACGCCCACAAATCGATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGGATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTg                                                                                                                                     <  1:726722/149‑1 (MQ=255)
         gAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTAcc                                                                                                                                   >  2:284086/1‑149 (MQ=255)
         gAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATCATAAAAAAATCCCCGGTAGCGTGTCCGTTGcc                                                                                                                                   >  2:70982/1‑149 (MQ=255)
          aaaGCATTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCg                                                                                                                                  <  2:309027/149‑1 (MQ=255)
           aaGCACTACGCCCATAAATCTATGCTGCCAAATGCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCgg                                                                                                                                 <  1:258833/149‑1 (MQ=255)
           aaGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCgg                                                                                                                                 >  2:287939/1‑149 (MQ=255)
           aaGCACCACGCCCACACATCTATGCTGCCAAATCCGAAGCTACCAGACCCCATACGCGTCTCGATGCTCACGACTATTTTGATTGCCTGCCCTGCTTGCGTATGGACGCCGCATGATACACCACTCACCGGCAGCGCGACAGCTGcccg                                                                                                                                 >  2:582695/1‑147 (MQ=255)
                     cccACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATAttttt                                                                                                                       <  1:61077/149‑1 (MQ=255)
                      ccACAAATCTATGCTGCCAAATCCGAAGCAAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATAtttttt                                                                                                                      <  2:578569/149‑1 (MQ=255)
                        acaAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTaa                                                                                                                    >  2:3350/1‑149 (MQ=255)
                            aTCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTc                                                                                                                >  1:664371/1‑149 (MQ=255)
                                   ctgcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGACGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTCCCGGGGATATTTTTTAACGTCCAAccgc                                                                                                         >  2:721176/1‑149 (MQ=255)
                                    tgcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAccgcc                                                                                                        >  2:192211/1‑149 (MQ=255)
                                     gcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAccgccg                                                                                                       <  2:268890/149‑1 (MQ=255)
                                      ccAAACGCGAAGCTAACAGAGCCAATACGCGTCTTGATGCACAGGACTATTTTGTGTGCCTGCGCTGCTTGCGTATGTACGCAGAAGGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACcgccgc                                                                                                      <  2:763372/149‑1 (MQ=255)
                                      caaaaCCCAAAGCCAACAGAGCCAACACGCCTCCAAATGCCCAAGACAATTTTGATTGCCTGCGCTGCCTGCGTATCTACAAAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACcgccgc                                                                                                      <  2:455298/147‑1 (MQ=255)
                                        aaaTCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCtt                                                                                                    <  2:48030/149‑1 (MQ=255)
                                           tCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAg                                                                                                 <  1:287447/149‑1 (MQ=255)
                                            ccGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCt                                                                                                     <  1:214414/144‑1 (MQ=255)
                                            ccGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCt                                                                                                     >  2:214414/1‑144 (MQ=255)
                                             cGAAGCTAACAGCGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGc                                                                                               <  1:31251/149‑1 (MQ=255)
                                              gAAGCTAACCGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGAGTTATGTTTTAACGTCCAACCGCCGCTTTAGGcc                                                                                              <  1:414348/149‑1 (MQ=255)
                                                aGCTAACAGCGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGt                                                                                            <  2:204686/149‑1 (MQ=255)
                                                     acggagCCAATACGCGTCTTCATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGGAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTttctt                                                                                       <  1:304137/146‑1 (MQ=255)
                                                     aCAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAccgccg                                                                                                       >  2:65900/1‑133 (MQ=255)
                                                     aCAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAccgccg                                                                                                       <  1:65900/133‑1 (MQ=255)
                                                       agagCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAAGCCGCTTCCTCg                                                                                     >  2:72819/1‑149 (MQ=255)
                                                             aaTACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTc                                                                                                                                          <  2:480677/90‑1 (MQ=255)
                                                             aaTACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTc                                                                                                                                          >  1:480677/1‑90 (MQ=255)
                                                              aTACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTcc                                                                                                               >  1:381027/1‑116 (MQ=255)
                                                              aTACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTcc                                                                                                               <  2:381027/116‑1 (MQ=255)
                                                                    gTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCAc                                                                        >  1:424242/1‑149 (MQ=255)
                                                                    gTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCAc                                                                        <  1:287939/149‑1 (MQ=255)
                                                                    gTCGTGAAGCACAGGAGTATTGTGATTGCCTGCCCTTCTGGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGCGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCAc                                                                        <  2:678183/149‑1 (MQ=255)
                                                                           tGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACga                                                                 >  2:824028/1‑149 (MQ=255)
                                                                                      aatttGATTGCCTGGGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTCTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAga                                                      <  2:218054/147‑1 (MQ=255)
                                                                                      aTTTCGCTTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAGAAATCCCCGGTAGCGTATCAGTTGCCGGGGATATTTTTTAAAGTCGAATCGCTGCTTTTGGCCGTTTCTTCGCTCCAGCATTCACCGGACGAGATTGCGTAga                                                      <  1:705897/149‑1 (MQ=255)
                                                                                        tttGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAgacg                                                    >  2:514070/1‑149 (MQ=255)
                                                                                             ttGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAGAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCt                                               >  2:499433/1‑149 (MQ=255)
                                                                                                ccTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGCCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCtttt                                            >  2:530571/1‑149 (MQ=255)
                                                                                                  tGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCtttttt                                          >  1:169449/1‑149 (MQ=255)
                                                                                                       tgctTGCGTATGTACGCAGAATGATAAAAAATTCCCCGGTAGTGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAGCGCGAGTAGAGGCCGGTTCTTCGCACCAGCATTCCCCGGACGCGATTGCGTAGACGACGCTTTTTTTGCCg                                     >  1:819531/1‑149 (MQ=255)
                                                                                                          ttGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAg                                  <  1:9314/149‑1 (MQ=255)
                                                                                                          ttGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAg                                  <  1:71581/149‑1 (MQ=255)
                                                                                                              gTATGTACGCAGAATGATAAAAAAATCACCGGTAGCGTCCCGCATGTGATTTAGATTTTTTGCTGGCCAACCGGCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTGGCAgg                              >  1:198295/1‑149 (MQ=255)
                                                                                                                   tACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCt                         >  2:537821/1‑149 (MQ=255)
                                                                                                                      gCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTCGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACTACCCTTTTTTTTCCGTAGCAGGCGTCTGat                      >  2:247256/1‑148 (MQ=255)
                                                                                                                         gAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCt                   >  1:249777/1‑149 (MQ=255)
                                                                                                                          aaTGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTg                  >  2:54626/1‑149 (MQ=255)
                                                                                                                           aTGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTgg                 <  1:3350/149‑1 (MQ=255)
                                                                                                                              aTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTCGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGGAGATGGCGTCTGACGCTGGGTc              >  2:835117/1‑149 (MQ=255)
                                                                                                                              aTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTc              <  2:169449/149‑1 (MQ=255)
                                                                                                                                 aaaaaaTCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGcc           <  1:835117/149‑1 (MQ=255)
                                                                                                                                  aaaaaTCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTATGACGCCGGGTCCCCa          >  2:192167/1‑149 (MQ=255)
                                                                                                                                          ccGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACAAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCATGCGCCTCACGCTCGCTCGCCATCGGCggc  >  2:673082/1‑147 (MQ=255)
                                                                                                                                          ccGGTAGCCTGTCAGCCGCCGTGGATACTTTTTAACGTCTAACCGCCGCTTTAGCCCGTTTCTTCGCACCAGCAGTCACCGAACCACATTGCGTAGACGACGCCTTTTTTGCCGTAGCAGGCGTCCGACGCTGGGTCGCCATCGGCGTa  <  2:190423/149‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                 
GCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTA  >  NC_000913_3_bme_pgi/3158758‑3159044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.