New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	3429875 =	49 (1.030)	3 (0.070)	3/260	6.7	6.4%	coding (149/258 nt)	yrdB	DUF1488 family protein
	?	NC_000913_3_bme_pgi	3429908 =	42 (0.960)					coding (116/258 nt)	yrdB	DUF1488 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGC  >  NC_000913_3_bme_pgi/3429767‑3430047                                                                                                                                              |                                                                                                                                            cAGGGTAACCAGACCCAGCCTTGAGCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGcc                                                                                                                                      <  1:649889/149‑1 (MQ=255)   gggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCag                                                                                                                                    >  1:499695/1‑149 (MQ=255)   gggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCag                                                                                                                                    >  1:178999/1‑149 (MQ=255)   gggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCATCAACCAAGTTTTCCGCTTCTGCTTCCATTTCCCAGCTATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATCCGCCAGACTCTCGCCag                                                                                                                                    >  2:390039/1‑149 (MQ=255)    ggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCaga                                                                                                                                   >  1:425305/1‑149 (MQ=255)      tAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAgaga                                                                                                                                 <  1:830457/149‑1 (MQ=255)          cAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGACAACTGGTTCACTACTATTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGGTcgc                                                                                                                             >  1:819269/1‑149 (MQ=255)                    cTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt                                                                                                                   <  2:804623/149‑1 (MQ=255)                     ttGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGTTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGCCTCTCGCCAGAGATCACGCATTTCAGtt                                                                                                                  >  2:5406/1‑149 (MQ=255)                     ttGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt                                                                                                                  <  2:499695/149‑1 (MQ=255)                       gATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGCAACCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTCGc                                                                                                                >  2:612652/1‑149 (MQ=255)                           atcTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGCCTGTCGCCAGAGATCGCGCATGTCAGTTGCATAc                                                                                                            >  1:738199/1‑149 (MQ=255)                             cTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCCTTTCAGTTGCATACCa                                                                                                          >  1:17407/1‑149 (MQ=255)                              ttCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAccct                                                                                                         >  2:160039/1‑147 (MQ=255)                                  cTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGATGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCAc                                                                                                     <  1:325146/149‑1 (MQ=255)                                       ttCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt                                                                                                                  <  1:484757/131‑1 (MQ=255)                                       ttCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt                                                                                                                  >  2:484757/1‑131 (MQ=255)                                       ttCCTGAATTAAGTTTTCCGCTTCTCCCTCCAGGTCCCAGCGATGCCGACGAAAACTTGCTAACCACTGTTCTGCCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGagag                                                                                                <  2:451321/149‑1 (MQ=255)                                                tAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAAc                                                                                       >  1:770383/1‑149 (MQ=255)                                                    ttttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATac                                                                                   >  1:603929/1‑149 (MQ=255)                                                       tCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATAcaca                                                                                >  2:334785/1‑149 (MQ=255)                                                            ttcttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttttt                                                                           >  1:306444/1‑149 (MQ=255)                                                             tcttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc                                                                                                                                         <  1:65192/86‑1 (MQ=255)                                                             tcttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc                                                                                                                                         >  2:65192/1‑86 (MQ=255)                                                              cttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTa                                                                         <  1:519585/149‑1 (MQ=255)                                                                  ttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATCCACATTTTTTATtct                                                                     >  1:786062/1‑149 (MQ=255)                                                                     cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCTCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGt                                                                  <  1:160039/149‑1 (MQ=255)                                                                     cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGt                                                                  >  1:42650/1‑149 (MQ=255)                                                                      aGGTCCCAGCTATGCTGACAAAAGCTCGCTAAGCAATATCCAGGCCTAGCCCGAGTAAAGCGATTCGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTc                                                                 <  2:508848/149‑1 (MQ=255)                                                                               cGATGCTGACGAAACCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTc                                                        <  2:763176/149‑1 (MQ=255)                                                                                gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGGCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTcc                                                       <  1:116822/149‑1 (MQ=255)                                                                                    cggACGAAAACTCGCTAACCACTGTTCTGACGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGt                                                   <  1:717253/147‑1 (MQ=255)                                                                                         gAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAGAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGa                                              >  1:634557/1‑149 (MQ=255)                                                                                         gAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTCTTATACTCGTCCCCCTCTTCCCTGTCCCGa                                              >  2:417666/1‑149 (MQ=255)                                                                                           aaaCTCGCTAACCACTGTTCTGGCCTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGaaa                                            <  1:11397/149‑1 (MQ=255)                                                                                                  cTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATg                                     <  2:738199/149‑1 (MQ=255)                                                                                                                 gCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCa                           <  2:820109/144‑1 (MQ=255)                                                                                                                 gCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCa                           >  1:820109/1‑144 (MQ=255)                                                                                                                  cGTATCCCCAGTAAAGCGACACTCCAGACCCTCGCCAGAGATCGCGTATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGa                     <  2:340355/149‑1 (MQ=255)                                                                                                                           tgTAAAGCGACACGCCAGCCTCGCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATtcctc            <  2:2374/148‑1 (MQ=255)                                                                                                                           aGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGTACAATtcctc            <  2:819269/149‑1 (MQ=255)                                                                                                                               aaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGc        <  1:205574/149‑1 (MQ=255)                                                                                                                                     tACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGc  >  2:473915/1‑149 (MQ=255)                                                                                                                                        gCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTAtt                                                                       <  2:115697/77‑1 (MQ=255)                                                                                                                                        gCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTAtt                                                                       >  1:115697/1‑77 (MQ=255)                                                                                                                                              |                                                                                                                                            CAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGC  >  NC_000913_3_bme_pgi/3429767‑3430047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.