| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_bme_pgi | 4,235,408 | Δ1 bp | intergenic (‑2175/‑499) | lysC ← / → yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_bme_pgi | 4,235,407 | 0 | A | . | 97.1% | 280.5 / ‑0.7 | 68 | intergenic (‑2174/‑500) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base . (30/36); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_bme_pgi/4235259‑4235550 | tCAATGCCTTCGATCCATGGGGCGGGGTACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGa < 1:8626/149‑1 (MQ=255) tGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGGGCGAAGGAAAGCTTGatcat > 2:164448/1‑145 (MQ=255) gCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGGGCAGGCTTTTTTCCCCGTTCTACCTGGCAAGGAAGGGGCGAGTGGGCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑atcatc < 2:717865/149‑1 (MQ=255) ttCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGACGGAAAGCTTG‑ATCAtcgtc > 2:65683/1‑149 (MQ=255) ttCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCAtcgtc > 1:172478/1‑149 (MQ=255) cGATCAATGGGGCGTGGAACGGGGTAAGGAACGGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGa < 2:158021/149‑1 (MQ=255) ggCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAGGGGGCGAGTGGTAGCGACGCTTCGACGCGAGGGCTTGTCGCGCAGCTGCATGCGCGAAGGGAAGCTTG‑ATCATCGTCGATATGTAGGcc > 2:397634/1‑149 (MQ=255) gAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa < 1:1001513/149‑1 (MQ=255) gAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATaa < 2:83640/149‑1 (MQ=255) aaCTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGGGCGAAGGCAAGCTTG‑ATCATCGTCGATATGCAGGCCGGATAAg > 2:306825/1‑149 (MQ=255) aaCTGGGAAAGGCACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAg < 1:423853/149‑1 (MQ=255) cTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCCTGCGCGAAGGAAAGCTTG‑ACAATCAGCGATATCTAGGCCGGATAATGc > 2:415990/1‑149 (MQ=255) tGGGGAAGGAACTGGCGACGGAACTGATGCGGGTTGTATCGGGCGAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCg < 1:521439/149‑1 (MQ=255) gggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGt > 2:407739/1‑149 (MQ=255) ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt > 2:549748/1‑149 (MQ=255) ggAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGTCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTGGGCCGGATAAGGCGTTCAcgc > 1:909207/1‑149 (MQ=255) acgtGGCGACGGAACTTGTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg < 2:438411/146‑1 (MQ=255) acgggCGACGGAAGTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccgc < 2:194982/146‑1 (MQ=255) ggCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc < 1:481921/149‑1 (MQ=255) cGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg < 1:694410/149‑1 (MQ=255) gACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGAAACCg‑g > 1:565767/1‑149 (MQ=255) ggAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGAATAAGGCGTTAAAGCCGCATCCG‑GCaa > 1:781198/1‑149 (MQ=255) aaCTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAAcc > 1:538308/1‑149 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGAt > 2:646234/1‑149 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTGGTCGCGCATCTGCATGCGCGAAGGAAAGCTT‑AATCATCGTCGATATGTAGGCCGGTTAAGCCGTTCACGCCGCATACG‑GGACCCGAt > 2:300335/1‑149 (MQ=255) gCCGGTTGTATCGGGCAAGGAAGGGGCCAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCt < 2:312934/149‑1 (MQ=255) cGGTTGTATCGGGCAAGGAAGGGGCGAGTGGGCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGa < 2:72426/149‑1 (MQ=255) ggtttgaTCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCTTTCACGCCGCATCCG‑GCAACCGATGCCTGAt < 2:303208/143‑1 (MQ=255) ggTTGTATCGGGCAAGGAAGGGGTGGGTGGTCGCGACGCTTCCATGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGAGATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGAt < 1:49580/149‑1 (MQ=39) cGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGAcgcg < 2:509066/149‑1 (MQ=255) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATCTGTAGGCCGGCTAAGGCGATCACGCCGCATCCG‑GCAACCGATACCTGATGCGACCCgg > 1:961242/1‑149 (MQ=255) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCAACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCgg > 2:677461/1‑149 (MQ=255) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGt > 1:647738/1‑149 (MQ=255) gaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg > 1:483354/1‑111 (MQ=255) gaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg < 2:483354/111‑1 (MQ=255) aggGGCGAGTGTGTGCGGCGCTTCCCCGCAAGTGCTCGGCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGTATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCtt < 2:699395/149‑1 (MQ=25) gggCGAGTGGTCGGGACGCGTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCCTCCG‑GCAACCGATGCCTGATAAGACGCGACCGCGTcgcat < 2:190149/149‑5 (MQ=38) cGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATAAGACGCGACCGCGTcgcatcag < 1:407739/149‑8 (MQ=38) gAGTGGTCGCGACGCTTCCACGCAAGGGGTTGTCGCGCATCTGGATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg < 1:562064/149‑1 (MQ=255) tGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCCCGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCt > 1:641178/1‑149 (MQ=255) tGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCt > 1:913560/1‑149 (MQ=255) tGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCt > 2:216621/1‑149 (MQ=255) ggTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa < 2:594423/149‑1 (MQ=255) tCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCGGGATAAGGCGTTCACGCCGCATCCG‑GCCACAGATGCCTGATGTGACGCGGTGGCGTCTTATCATGCCTatc > 1:969089/1‑147 (MQ=38) cgcgACGCTTCCACGCAAGGGCTGGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg < 1:250799/149‑1 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGTGGCGCATCTGCATAAGCGAAGGAAAGCTT‑AATCATCGTCGATATGGAGGCCGGAGAAGGCCGTCTCGCCGCAACCGCGGACCCGGT‑ACTGATGGCACGCGGTCGCGTCTTCACAGGCCTCCatg > 2:112187/1‑147 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGCTGCGACGCGGTCGCGTCTTATCAGGCCTACAgg > 2:653118/1‑149 (MQ=255) aCGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGGCGCGTCTTATCAGGCCTACAGGTCg > 2:989199/1‑149 (MQ=255) tgccACGAGAGGGCGTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc < 2:19652/147‑1 (MQ=25) aCGCAAGGGCTTGTAGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCACGCCTCCAGGTAGATTACGat > 1:130960/1‑149 (MQ=25) cGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGTTCGATTCCGgta > 2:23327/1‑149 (MQ=255) cGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata < 2:909207/149‑1 (MQ=255) gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTcgc > 2:198969/1‑117 (MQ=255) gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTcgc < 1:198969/117‑1 (MQ=255) gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt < 2:441266/137‑1 (MQ=255) gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt > 1:441266/1‑137 (MQ=255) gCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 1:677461/149‑1 (MQ=255) ttGTCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCAGTGGGGATATGGAGGCCCGACAAAGAGTAACGGCCCCTTGCT‑GTTACCGATGCCTGAGGCGAGCACGTCCCGTCTTATCGGGCCTACAGGTGGCGTCCGATACGTACAGCg > 2:162967/1‑149 (MQ=255) tCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATACCTGATGCGACGCGGTc < 2:592870/104‑1 (MQ=255) tCGCGCATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATACCTGATGCGACGCGGTc > 1:592870/1‑104 (MQ=255) cgcATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATACAGATCTGTACATCGTATTCg < 2:497146/149‑1 (MQ=255) cgcATCTGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGACTGACAGTGCTCGTTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCg > 1:488286/1‑149 (MQ=37) tcggCAGGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCaa < 2:635626/146‑1 (MQ=255) tGCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATCTGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAtt < 1:415990/149‑1 (MQ=255) ggCATGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGAGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAtt < 2:259550/148‑1 (MQ=255) aTGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt < 1:925532/149‑1 (MQ=255) aTGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt < 1:4258/149‑1 (MQ=255) tGCGCGAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATCCGGCAATTAATa < 1:403203/149‑1 (MQ=255) gAAGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATCTGTACATCGTATTCGGCAATTAATACATAg > 2:858008/1‑149 (MQ=255) gaaGCTTG‑ATCATCGTCGATATGTACGCCGGATAAGGCGTTCACCCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACga < 1:917238/148‑1 (MQ=255) aGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACgatt < 1:164448/149‑1 (MQ=255) | TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGAAGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG‑GCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_bme_pgi/4235259‑4235550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |